Medvedev Lab DrugDomain Protein List Small Molecules Download GitHub
Ligand name: CYTIDINE-5'-DIPHOSPHATE
PDB ligand accession: CDP
DrugBank: DB04555
PubChem: 6132
ChEMBL: CHEMBL425252
InChI Key: ZWIADYZPOWUWEW-XVFCMESISA-N
SMILES: C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)O)O)O

ClassyFire chemical classification:

List of proteins that are targets for CDP

# DrugDomain Data UniProt Accession Protein name Drug Action Affinity data
1 Q99IB8_CDP Q99IB8 Genome polyprotein [Cleaved n/a
2 Q1CVJ4_CDP Q1CVJ4 Chromosome-partitioning protein ParB n/a
3 Q9H9S5_CDP Q9H9S5 Ribitol 5-phosphate transferase n/a
4 I7FJF7_CDP I7FJF7 8-oxo-dGTP diphosphatase (EC n/a
5 Q5HFV4_CDP Q5HFV4 Nucleoside diphosphate kinase n/a
6 Q7Z8P9_CDP Q7Z8P9 Nucleoside diphosphate kinase n/a
7 Q63T71_CDP Q63T71 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n/a
8 A1S6W5_CDP A1S6W5 Regulatory inactivation of n/a
9 D9J2T9_CDP D9J2T9 rRNA N-glycosylase (EC n/a
10 B2HP08_CDP B2HP08 Fido domain-containing protein n/a
11 O57978_CDP O57978 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC n/a
12 G4RIN4_CDP G4RIN4 SiaD n/a
13 P53131_CDP P53131 Pre-mRNA-splicing factor ATP-dependent n/a
14 P72097_CDP P72097 N-acetyllactosaminide alpha-2,3-sialyltransferase (EC n/a
15 P62617_CDP P62617 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n/a
16 P0A0Z8_CDP P0A0Z8 N-acylneuraminate cytidylyltransferase (EC n/a
17 P23921_CDP P23921 Ribonucleoside-diphosphate reductase large n/a
18 P21524_CDP P21524 Ribonucleoside-diphosphate reductase large n/a
19 Q381H3_CDP Q381H3 Nucleoside diphosphate kinase n/a
20 P61136_CDP P61136 Nucleoside diphosphate kinase n/a
21 Q5UQL3_CDP Q5UQL3 Nucleoside diphosphate kinase n/a
22 Q8SS83_CDP Q8SS83 Probable cytidylate kinase n/a
23 P36663_CDP P36663 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n/a
24 A0A6B7HXY7_CDP A0A6B7HXY7 Genome polyprotein n/a
25 P15424_CDP P15424 ATP-dependent RNA helicase n/a
26 O33839_CDP O33839 Vitamin B12-dependent ribonucleotide n/a
27 Q5SL35_CDP Q5SL35 Cytidylate kinase (CK) n/a
28 Q5F8Z6_CDP Q5F8Z6 Ribonucleoside-diphosphate reductase (EC n/a
29 A0R559_CDP A0R559 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n/a
30 P00558_CDP P00558 Phosphoglycerate kinase 1 n/a
31 Q9V119_CDP Q9V119 Exosome complex component n/a
32 P9WPQ5_CDP P9WPQ5 Dethiobiotin synthetase BioD n/a
33 O67060_CDP O67060 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) n/a
34 P42216_CDP P42216 3-deoxy-manno-octulosonate cytidylyltransferase (EC n/a
35 D2SNF7_CDP D2SNF7 Cytidylyl-2-hydroxypropylphosphonate hydrolase (EC n/a
36 O43173_CDP O43173 Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3 n/a
37 Q9HUM0_CDP Q9HUM0 RNA-binding protein Hfq n/a
38 P0A6I0_CDP P0A6I0 Cytidylate kinase (CK) n/a
39 P26497_CDP P26497 Stage 0 sporulation n/a
40 Q5I3C1_CDP Q5I3C1 Genome polyprotein n/a
41 P19913_CDP P19913 Carbon monoxide dehydrogenase n/a
42 P62368_CDP P62368 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, n/a
43 P00452_CDP P00452 Ribonucleoside-diphosphate reductase 1 n/a
44 Q60365_CDP Q60365 Riboflavin kinase (RFK) n/a
45 P14169_CDP P14169 CDP-paratose 2-epimerase (EC n/a
46 Q9V118_CDP Q9V118 Exosome complex component n/a
47 O27985_CDP O27985 CDP-alcohol phosphatidyltransferase AF-2299-like n/a
48 Q8RQP5_CDP Q8RQP5 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n/a
49 Q6A562_CDP Q6A562 RNA-dependent RNA polymerase n/a