PDB ligand accession: NAG
DrugBank: DB00141
PubChem:
ChEMBL:
InChI Key: OVRNDRQMDRJTHS-FMDGEEDCSA-N
SMILES: CC(=O)NC1C(C(C(OC1O)CO)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Organic oxygen compounds
- Class: Organooxygen compounds
- Subclass: Carbohydrates and carbohydrate conjugates
- Class: Organooxygen compounds
- Superclass: Organic oxygen compounds
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
6VTT | Download | Experimental | e6vttF3 e6vttA1 e6vttE2 e6vttC1 e6vttG2 e6vttB1 e6vttF1 e6vttF3 e6vttF2 e6vttF3 e6vttE3 e6vttE2 e6vttE1 e6vttE2 e6vttE1 e6vttG1 e6vttG3 e6vttG2 e6vttG1 e6vttG2 | gp120 inner domain MPER trimer gp120 inner domain MPER trimer gp120 inner domain MPER trimer V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain | LigPlot |
6VRW | Download | Experimental | e6vrwG3 e6vrwA3 e6vrwD1 e6vrwG1 e6vrwG2 e6vrwG2 e6vrwG3 e6vrwA1 e6vrwA2 e6vrwA2 e6vrwA3 e6vrwD2 e6vrwD3 e6vrwD1 e6vrwD3 | Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain | LigPlot |
7LY9 | Download | Experimental | e7ly9G3 e7ly9F1 e7ly9D3 e7ly9J1 e7ly9N1 e7ly9K2 e7ly9N1 e7ly9G2 e7ly9G2 e7ly9G3 e7ly9D1 e7ly9D3 e7ly9K1 e7ly9K2 e7ly9K1 | gp120 inner domain MPER trimer Ribosomal protein L31e-like MPER trimer MPER trimer gp120 inner domain MPER trimer Ribosomal protein L31e-like Ribosomal protein L31e-like gp120 inner domain gp120 inner domain Ribosomal protein L31e-like Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like | LigPlot |
6VZI | Download | Experimental | e6vziG3 e6vziG1 e6vziG2 e6vziG3 e6vziG2 | gp120 inner domain V1/V2 domain in HIV gp120 Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like | LigPlot |