PDB ligand accession: NAG
DrugBank: DB00141
PubChem:
ChEMBL:
InChI Key: OVRNDRQMDRJTHS-FMDGEEDCSA-N
SMILES: CC(=O)NC1C(C(C(OC1O)CO)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Organic oxygen compounds
- Class: Organooxygen compounds
- Subclass: Carbohydrates and carbohydrate conjugates
- Class: Organooxygen compounds
- Superclass: Organic oxygen compounds
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 8SAR | Download | Experimental | e8sarA2 e8sarF1 e8sarK3 e8sarA1 e8sarF2 e8sarK1 | V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120 Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like | LigPlot |
| 8DTO | Download | Experimental | e8dtoE1 e8dtoA2 e8dtoI1 e8dtoE2 e8dtoE3 e8dtoE1 e8dtoE3 e8dtoA3 e8dtoA1 e8dtoA1 e8dtoA2 e8dtoI3 e8dtoI2 e8dtoI1 e8dtoI2 | Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain | LigPlot |
| 6UM5 | Download | Experimental | e6um5A3 e6um5E3 e6um5I1 e6um5A2 e6um5E1 e6um5I2 | Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120 | LigPlot |
| 7LUA | Download | Experimental | e7luaa1 e7luac2 e7luae1 e7luae3 e7luae1 e7luae3 e7luae2 e7luaa2 e7luaa1 e7luaa2 e7luaa3 e7luac1 e7luac1 e7luac2 e7luac3 e7luac2 e7luac3 | Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 Ribosomal protein L31e-like V1/V2 domain in HIV gp120 | LigPlot |
| 6UM6 | Download | Experimental | e6um6A1 e6um6E1 e6um6I1 | gp120 inner domain gp120 inner domain gp120 inner domain | LigPlot |
| 6UM7 | Download | Experimental | e6um7A1 e6um7E2 e6um7I2 e6um7A1 e6um7A3 e6um7A2 e6um7E2 e6um7E3 e6um7E1 e6um7I2 e6um7I3 e6um7I1 | Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 | LigPlot |
| 8EU8 | Download | Experimental | e8eu8A2 e8eu8B1 e8eu8C2 e8eu8A4 e8eu8A3 e8eu8A1 e8eu8A3 e8eu8B3 e8eu8B2 e8eu8B2 e8eu8B4 e8eu8C3 e8eu8C4 e8eu8C1 e8eu8C4 | MPER trimer MPER trimer MPER trimer V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain | LigPlot |
| 7L6O | Download | Experimental | e7l6oa3 e7l6oc1 e7l6oe1 e7l6oa2 e7l6oa2 e7l6oa3 e7l6oa1 e7l6oc2 e7l6oc1 e7l6oc2 e7l6oc3 e7l6oe3 e7l6oe1 e7l6oe3 e7l6oe2 | Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like gp120 inner domain gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 | LigPlot |
| 8DOW | Download | Experimental | e8dowA1 e8dowA3 e8dowE2 e8dowE3 e8dowI2 e8dowI3 e8dowI3 | gp120 inner domain Ribosomal protein L31e-like Ribosomal protein L31e-like gp120 inner domain gp120 inner domain Ribosomal protein L31e-like Ribosomal protein L31e-like | LigPlot |