PDB ligand accession: SQD
DrugBank: n/a
PubChem:
ChEMBL:
InChI Key: RVUUQPKXGDTQPG-JUDHQOGESA-N
SMILES: CCCCCCCCCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)CS(=O)(=O)O)O)O)O)OC(=O)CCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerolipids
- Subclass: Glycosylglycerols
- Class: Glycerolipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6JLM | Download | Experimental | e6jlmA1 e6jlmb1 e6jlmT1 e6jlmB2 e6jlmL1 e6jlml1 e6jlmm1 e6jlmt1 e6jlmb1 e6jlmL1 e6jlml1 e6jlmM1 e6jlmT1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 5GTH | Download | Experimental | e5gthb2 e5gthT1 e5gthB2 e5gthL1 e5gthl1 e5gtht1 e5gthb2 e5gthL1 e5gthl1 e5gthT1 e5gthB2 e5gtht1 | Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLP | Download | Experimental | e6jlpA1 e6jlpb1 e6jlpT1 e6jlpB2 e6jlpL1 e6jlpl1 e6jlpm1 e6jlpt1 e6jlpb1 e6jlpL1 e6jlpl1 e6jlpM1 e6jlpT1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 4UB8 | Download | Experimental | e4ub8A1 e4ub8b2 e4ub8T1 e4ub8b2 e4ub8L1 e4ub8l1 e4ub8M1 e4ub8T1 e4ub8B2 e4ub8L1 e4ub8l1 e4ub8m1 e4ub8t1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLJ | Download | Experimental | e6jljA1 e6jljT1 e6jljb1 e6jljB2 e6jljL1 e6jljl1 e6jljm1 e6jljt1 e6jljL1 e6jljM1 e6jljT1 e6jljb1 e6jljl1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL | LigPlot |
| 7D1U | Download | Experimental | e7d1uA1 e7d1ub1 e7d1uh1 e7d1uT1 e7d1ub1 e7d1uL1 e7d1ul1 e7d1uM1 e7d1uT1 e7d1ua1 e7d1uB2 e7d1uH1 e7d1ut1 e7d1uB2 e7d1uL1 e7d1ul1 e7d1um1 e7d1ut1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 7CJJ | Download | Experimental | e7cjjA1 e7cjjb1 e7cjjT1 e7cjjB1 e7cjjL1 e7cjjl1 e7cjjm1 e7cjjt1 e7cjjb1 e7cjjL1 e7cjjl1 e7cjjM1 e7cjjT1 e7cjja1 e7cjjB1 e7cjjt1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 7CZL | Download | Experimental | e7czlA1 e7czlb2 e7czlh1 e7czlT1 e7czlb2 e7czlL1 e7czll1 e7czlM1 e7czlT1 e7czla1 e7czlB2 e7czlH1 e7czlt1 e7czlB2 e7czlL1 e7czll1 e7czlm1 e7czlt1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 7D1T | Download | Experimental | e7d1tA1 e7d1tT1 e7d1tb2 e7d1tB1 e7d1tL1 e7d1tl1 e7d1tm1 e7d1tt1 e7d1tL1 e7d1tM1 e7d1tT1 e7d1tb2 e7d1tl1 e7d1tB1 e7d1ta1 e7d1tt1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLN | Download | Experimental | e6jlnA1 e6jlnb1 e6jlnT1 e6jlnB1 e6jlnL1 e6jlnl1 e6jlnm1 e6jlnt1 e6jlnb1 e6jlnL1 e6jlnl1 e6jlnM1 e6jlnT1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLO | Download | Experimental | e6jloA1 e6jlob1 e6jloT1 e6jloa1 e6jloB2 e6jlot1 e6jlob1 e6jloL1 e6jlol1 e6jloM1 e6jloT1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 8GN0 | Download | Experimental | e8gn0B1 e8gn0L1 e8gn0m1 e8gn0l1 e8gn0t1 e8gn0A1 e8gn0T1 e8gn0b1 e8gn0L1 e8gn0T1 e8gn0b1 e8gn0l1 e8gn0M1 | Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM | LigPlot |
| 5WS5 | Download | Experimental | e5ws5b1 e5ws5T1 e5ws5B2 e5ws5L1 e5ws5l1 e5ws5t1 e5ws5B2 e5ws5t1 e5ws5b1 e5ws5L1 e5ws5l1 e5ws5T1 | Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 3WU2 | Download | Experimental | e3wu2A1 e3wu2b2 e3wu2T1 e3wu2B2 e3wu2L1 e3wu2l1 e3wu2m1 e3wu2t1 e3wu2b2 e3wu2L1 e3wu2l1 e3wu2M1 e3wu2T1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 4UB6 | Download | Experimental | e4ub6b2 e4ub6T1 e4ub6B2 e4ub6L1 e4ub6l1 e4ub6t1 e4ub6b2 e4ub6L1 e4ub6l1 e4ub6T1 | Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLK | Download | Experimental | e6jlkA1 e6jlkb2 e6jlkT1 e6jlkB2 e6jlkL1 e6jlkl1 e6jlkm1 e6jlkt1 e6jlkb2 e6jlkL1 e6jlkl1 e6jlkM1 e6jlkT1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 8GN2 | Download | Experimental | e8gn2A1 e8gn2b1 e8gn2T1 e8gn2b1 e8gn2L1 e8gn2l1 e8gn2M1 e8gn2T1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 5B66 | Download | Experimental | e5b66A1 e5b66b2 e5b66h1 e5b66T1 e5b66b2 e5b66L1 e5b66l1 e5b66M1 e5b66T1 e5b66B1 e5b66L1 e5b66l1 e5b66m1 e5b66t1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 5B5E | Download | Experimental | e5b5eA1 e5b5eb2 e5b5eT1 e5b5eB2 e5b5eL1 e5b5el1 e5b5em1 e5b5et1 e5b5eb2 e5b5eL1 e5b5el1 e5b5eM1 e5b5eT1 e5b5ea1 e5b5eB2 e5b5et1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 5GTI | Download | Experimental | e5gtib2 e5gtiT1 e5gtiB2 e5gtiL1 e5gtil1 e5gtit1 e5gtib2 e5gtiL1 e5gtil1 e5gtiT1 e5gtiB2 e5gtit1 | Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 5WS6 | Download | Experimental | e5ws6b1 e5ws6T1 e5ws6B1 e5ws6L1 e5ws6l1 e5ws6t1 e5ws6B1 e5ws6t1 e5ws6b1 e5ws6L1 e5ws6l1 e5ws6T1 | Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 5V2C | Download | Experimental | e5v2cb2 e5v2cL1 e5v2cl1 e5v2cM1 e5v2cT1 e5v2cb2 e5v2ch1 e5v2cB1 e5v2cL1 e5v2cl1 e5v2cm1 e5v2ct1 | Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 7CJI | Download | Experimental | e7cjiA1 e7cjiT1 e7cjib2 e7cjiB2 e7cjiL1 e7cjim1 e7cjil1 e7cjit1 e7cjiL1 e7cjiT1 e7cjib2 e7cjil1 e7cjiM1 e7cjiB2 e7cjia1 e7cjit1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 8GN1 | Download | Experimental | e8gn1A1 e8gn1b2 e8gn1h1 e8gn1T1 e8gn1B1 e8gn1L1 e8gn1l1 e8gn1m1 e8gn1t1 e8gn1b2 e8gn1L1 e8gn1l1 e8gn1M1 e8gn1T1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLL | Download | Experimental | e6jllA1 e6jllb2 e6jllT1 e6jllB1 e6jllL1 e6jlll1 e6jllm1 e6jllt1 e6jllb2 e6jllL1 e6jlll1 e6jllM1 e6jllT1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |
| 7COU | Download | Experimental | e7couA1 e7coub1 e7couT1 e7couB1 e7couL1 e7coul1 e7coum1 e7cout1 e7coua1 e7couB1 e7cout1 e7coub1 e7couL1 e7coul1 e7couM1 e7couT1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein T, PsbT | LigPlot |