PDB ligand accession: SQD
DrugBank: n/a
PubChem:
ChEMBL:
InChI Key: RVUUQPKXGDTQPG-JUDHQOGESA-N
SMILES: CCCCCCCCCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)CS(=O)(=O)O)O)O)O)OC(=O)CCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerolipids
- Subclass: Glycosylglycerols
- Class: Glycerolipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6JLM | Download | Experimental | e6jlmD1 e6jlmE1 e6jlmF1 e6jlmX1 e6jlmR1 e6jlmd1 e6jlme1 e6jlmf1 e6jlmx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 7EDA | Download | Experimental | e7edaD1 e7edaE1 e7edaF1 e7edaX1 e7edaR1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 5GTH | Download | Experimental | e5gthD1 e5gthE1 e5gthF1 e5gthX1 e5gthR1 e5gthd1 e5gthe1 e5gthf1 e5gthx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 6JLP | Download | Experimental | e6jlpD1 e6jlpE1 e6jlpF1 e6jlpX1 e6jlpR1 e6jlpd1 e6jlpe1 e6jlpf1 e6jlpx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 4UB8 | Download | Experimental | e4ub8D1 e4ub8E1 e4ub8F1 e4ub8X1 e4ub8R1 e4ub8d1 e4ub8e1 e4ub8f1 e4ub8x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 6JLJ | Download | Experimental | e6jljD1 e6jljE1 e6jljF1 e6jljX1 e6jljR1 e6jljd1 e6jlje1 e6jljf1 e6jljx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 7D1U | Download | Experimental | e7d1uD1 e7d1uE1 e7d1uF1 e7d1uX1 e7d1uR1 e7d1ud1 e7d1ue1 e7d1uf1 e7d1ux1 e7d1ur1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 7CJJ | Download | Experimental | e7cjjD1 e7cjjE1 e7cjjF1 e7cjjX1 e7cjjR1 e7cjjd1 e7cjje1 e7cjjf1 e7cjjx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 7D1T | Download | Experimental | e7d1tD1 e7d1tE1 e7d1tF1 e7d1tX1 e7d1tR1 e7d1td1 e7d1te1 e7d1tf1 e7d1tx1 e7d1tr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 6JLN | Download | Experimental | e6jlnD1 e6jlnE1 e6jlnF1 e6jlnX1 e6jlnR1 e6jlnd1 e6jlne1 e6jlnf1 e6jlnx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 6JLO | Download | Experimental | e6jloD1 e6jloE1 e6jloF1 e6jloX1 e6jloR1 e6jlod1 e6jloe1 e6jlof1 e6jlox1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 8GN0 | Download | Experimental | e8gn0F1 e8gn0X1 e8gn0D1 e8gn0E1 e8gn0d1 e8gn0e1 e8gn0f1 e8gn0x1 | Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 5WS5 | Download | Experimental | e5ws5D1 e5ws5E1 e5ws5F1 e5ws5X1 e5ws5R1 e5ws5d1 e5ws5e1 e5ws5f1 e5ws5x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 3WU2 | Download | Experimental | e3wu2D1 e3wu2E1 e3wu2F1 e3wu2X1 e3wu2d1 e3wu2e1 e3wu2f1 e3wu2x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 4UB6 | Download | Experimental | e4ub6D1 e4ub6E1 e4ub6F1 e4ub6X1 e4ub6R1 e4ub6d1 e4ub6e1 e4ub6f1 e4ub6x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 6JLK | Download | Experimental | e6jlkD1 e6jlkE1 e6jlkF1 e6jlkX1 e6jlkR1 e6jlkd1 e6jlke1 e6jlkf1 e6jlkx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 8GN2 | Download | Experimental | e8gn2E1 e8gn2D1 e8gn2F1 e8gn2X1 e8gn2R1 e8gn2d1 e8gn2e1 e8gn2f1 e8gn2x1 | Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 5B66 | Download | Experimental | e5b66D1 e5b66E1 e5b66F1 e5b66X1 e5b66d1 e5b66e1 e5b66f1 e5b66x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 5B5E | Download | Experimental | e5b5eD1 e5b5eE1 e5b5eF1 e5b5eX1 e5b5ed1 e5b5ee1 e5b5ef1 e5b5ex1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 5GTI | Download | Experimental | e5gtiD1 e5gtiE1 e5gtiF1 e5gtiX1 e5gtiR1 e5gtid1 e5gtie1 e5gtif1 e5gtix1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 5WS6 | Download | Experimental | e5ws6D1 e5ws6E1 e5ws6F1 e5ws6X1 e5ws6R1 e5ws6d1 e5ws6e1 e5ws6f1 e5ws6x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 5V2C | Download | Experimental | e5v2cD1 e5v2cE1 e5v2cF1 e5v2cX1 e5v2cd1 e5v2ce1 e5v2cf1 e5v2cx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 7CJI | Download | Experimental | e7cjiD1 e7cjiE1 e7cjiF1 e7cjiX1 e7cjiR1 e7cjid1 e7cjie1 e7cjif1 e7cjix1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 8GN1 | Download | Experimental | e8gn1R1 e8gn1D1 e8gn1E1 e8gn1F1 e8gn1X1 e8gn1d1 e8gn1e1 e8gn1f1 e8gn1x1 | Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 6JLL | Download | Experimental | e6jllD1 e6jllE1 e6jllF1 e6jllX1 e6jllR1 e6jlld1 e6jlle1 e6jllf1 e6jllx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 7COU | Download | Experimental | e7couD1 e7couE1 e7couF1 e7couX1 e7couR1 e7coud1 e7coue1 e7couf1 e7coux1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |