PDB ligand accession: DGD
DrugBank: DB03426
PubChem:
ChEMBL: n/a
InChI Key: LDQFLSUQYHBXSX-HXXRYREZSA-N
SMILES: CCCCCCCCCCCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)COC2C(C(C(C(O2)CO)O)O)O)O)O)O)OC(=O)CCCCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerolipids
- Subclass: Glycosylglycerols
- Class: Glycerolipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6JLM | Download | Experimental | e6jlmA1 e6jlmC1 e6jlmD1 e6jlmJ1 e6jlmV1 e6jlma1 e6jlmc1 e6jlmd1 e6jlmj1 e6jlmv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 7EDA | Download | Experimental | e7edaA1 e7edaC1 e7edaD1 e7edaJ1 e7edaV1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 6JLP | Download | Experimental | e6jlpA1 e6jlpC1 e6jlpD1 e6jlpJ1 e6jlpV1 e6jlpa1 e6jlpc1 e6jlpd1 e6jlpj1 e6jlpv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 4UB8 | Download | Experimental | e4ub8A1 e4ub8C1 e4ub8D1 e4ub8J1 e4ub8V1 e4ub8a1 e4ub8c1 e4ub8d1 e4ub8j1 e4ub8v1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 6JLJ | Download | Experimental | e6jljA1 e6jljD1 e6jljV1 e6jljC1 e6jljJ1 e6jljc1 e6jljj1 e6jlja1 e6jljd1 e6jljv1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome c-like Photosystem II antenna protein-like Photosystem II reaction center protein J, PsbJ Photosystem II antenna protein-like Photosystem II reaction center protein J, PsbJ Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome c-like | LigPlot |
| 7D1U | Download | Experimental | e7d1uA1 e7d1uC1 e7d1uD1 e7d1uJ1 e7d1uV1 e7d1ua1 e7d1uc1 e7d1ud1 e7d1uj1 e7d1uv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 7CJJ | Download | Experimental | e7cjjA1 e7cjjC1 e7cjjD1 e7cjjJ1 e7cjjV1 e7cjja1 e7cjjc1 e7cjjd1 e7cjjj1 e7cjjv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 7CZL | Download | Experimental | e7czlA1 e7czlC1 e7czlD1 e7czla1 e7czlc1 e7czld1 e7czla1 e7czlc1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like | LigPlot |
| 7D1T | Download | Experimental | e7d1tA1 e7d1tC1 e7d1tD1 e7d1tJ1 e7d1tV1 e7d1ta1 e7d1tc1 e7d1td1 e7d1tj1 e7d1tv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 6JLN | Download | Experimental | e6jlnA1 e6jlnC1 e6jlnD1 e6jlnJ1 e6jlnV1 e6jlna1 e6jlnc1 e6jlnd1 e6jlnj1 e6jlnv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 6JLO | Download | Experimental | e6jloA1 e6jloC1 e6jloD1 e6jloJ1 e6jloV1 e6jloa1 e6jloc1 e6jlod1 e6jloj1 e6jlov1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 8GN0 | Download | Experimental | e8gn0A1 e8gn0V1 e8gn0C1 e8gn0D1 e8gn0J1 e8gn0c1 e8gn0d1 e8gn0j1 e8gn0a1 e8gn0v1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome c-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Bacterial photosystem II reaction centre L and M subunits-like Cytochrome c-like | LigPlot |
| 3WU2 | Download | Experimental | e3wu2A1 e3wu2C1 e3wu2D1 e3wu2J1 e3wu2V1 e3wu2a1 e3wu2c1 e3wu2d1 e3wu2j1 e3wu2v1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 6JLK | Download | Experimental | e6jlkA1 e6jlkC1 e6jlkD1 e6jlkJ1 e6jlkV1 e6jlka1 e6jlkc1 e6jlkd1 e6jlkj1 e6jlkv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 8GN2 | Download | Experimental | e8gn2A1 e8gn2C1 e8gn2D1 e8gn2J1 e8gn2V1 e8gn2a1 e8gn2c1 e8gn2d1 e8gn2j1 e8gn2v1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 5B66 | Download | Experimental | e5b66A1 e5b66C1 e5b66D1 e5b66J1 e5b66V1 e5b66a1 e5b66c1 e5b66d1 e5b66j1 e5b66v1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 5B5E | Download | Experimental | e5b5eA1 e5b5eC1 e5b5eD1 e5b5eJ1 e5b5eV1 e5b5ea1 e5b5ec1 e5b5ed1 e5b5ej1 e5b5ev1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 7DXH | Download | Experimental | e7dxhc1 e7dxha1 e7dxhd1 e7dxhc1 e7dxha1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like | LigPlot |
| 5V2C | Download | Experimental | e5v2cA1 e5v2cC1 e5v2cD1 e5v2cJ1 e5v2cV1 e5v2ca1 e5v2cc1 e5v2cd1 e5v2cj1 e5v2cv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 7CJI | Download | Experimental | e7cjiA1 e7cjiD1 e7cjiV1 e7cjiC1 e7cjiJ1 e7cjic1 e7cjij1 e7cjia1 e7cjid1 e7cjiv1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome c-like Photosystem II antenna protein-like Photosystem II reaction center protein J, PsbJ Photosystem II antenna protein-like Photosystem II reaction center protein J, PsbJ Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome c-like | LigPlot |
| 8GN1 | Download | Experimental | e8gn1A1 e8gn1C1 e8gn1D1 e8gn1J1 e8gn1V1 e8gn1a1 e8gn1c1 e8gn1d1 e8gn1j1 e8gn1v1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 6JLL | Download | Experimental | e6jllA1 e6jllC1 e6jllD1 e6jllJ1 e6jllV1 e6jlla1 e6jllc1 e6jlld1 e6jllj1 e6jllv1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |
| 3A0B | Download | Experimental | e3a0bC1 e3a0bA1 e3a0bV1 e3a0bJ1 e3a0bD1 e3a0bc1 e3a0ba1 e3a0bd1 e3a0bj1 e3a0bv1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome c-like Photosystem II reaction center protein J, PsbJ Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Cytochrome c-like | LigPlot |