Ligand name: MENAQUINONE 8
PDB ligand accession: MQ8
DrugBank: n/a
PubChem: 5288843
ChEMBL: n/a
InChI Key: LXKDFTDVRVLXFY-ACMRXAIVSA-N
SMILES: CC1=C(C(=O)c2ccccc2C1=O)CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Lipids and lipid-like molecules
    • Class: Prenol lipids
      • Subclass: Quinone and hydroquinone lipids

List of PDB structures and/or AlphaFold models with target protein D2Z0P3

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
5B5M	Download	Experimental	e5b5mL1 e5b5mM1 e5b5mA1 e5b5m91 e5b5mx1 e5b5my1 e5b5mm1 e5b5ml1	Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial light-harvesting complex subunits Bacterial light-harvesting complex subunits Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial light-harvesting complex subunits Bacterial light-harvesting complex subunits	LigPlot
7C52	Download	Experimental	e7c52L1 e7c52M1 e7c52A1	Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial light-harvesting complex subunits	LigPlot
5Y5S	Download	Experimental	e5y5sL1 e5y5sM1 e5y5sA1	Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial light-harvesting complex subunits	LigPlot
4V8K	Download	Experimental	e4v8kAL1 e4v8kAM1 e4v8kAH2 e4v8kAA1 e4v8kAD1 e4v8kBL1 e4v8kBM1 e4v8kBA1	Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction centre subunit H, transmembrane region Bacterial light-harvesting complex subunits Bacterial light-harvesting complex subunits Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial light-harvesting complex subunits	LigPlot
3WMM	Download	Experimental	e3wmmL1 e3wmmM1 e3wmmH1 e3wmmH2 e3wmmD1	Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like SH3 Photosystem II reaction centre subunit H, transmembrane region Bacterial light-harvesting complex subunits	LigPlot
5B5N	Download	Experimental	e5b5nL1 e5b5nM1 e5b5nA1 e5b5n91 e5b5nx1 e5b5ny1 e5b5nm1 e5b5nl1	Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial light-harvesting complex subunits Bacterial light-harvesting complex subunits Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial light-harvesting complex subunits Bacterial light-harvesting complex subunits	LigPlot