Ligand name: THYMIDINE-5'-DIPHOSPHATE
PDB ligand accession: TYD
DrugBank: DB03103
PubChem: 164628
ChEMBL: CHEMBL259724
InChI Key: UJLXYODCHAELLY-XLPZGREQSA-N
SMILES: CC1=CN(C(=O)NC1=O)C2CC(C(O2)COP(=O)(O)OP(=O)(O)O)O
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Pyrimidine nucleotides
      • Subclass: Pyrimidine deoxyribonucleotides

List of PDB structures and/or AlphaFold models with target protein D7WGJ0

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
3VBP	Download	Experimental	e3vbpA2 e3vbpC2 e3vbpE2 e3vbpC2 e3vbpA2 e3vbpE2	Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix	LigPlot
3VBM	Download	Experimental	e3vbmC2 e3vbmA2 e3vbmE2 e3vbmC2 e3vbmE2 e3vbmA2	Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix	LigPlot
3VBJ	Download	Experimental	e3vbjA2 e3vbjC2 e3vbjE2 e3vbjC2 e3vbjE2 e3vbjA2	Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix	LigPlot
3VBN	Download	Experimental	e3vbnC2 e3vbnA2 e3vbnE2 e3vbnC2 e3vbnE2 e3vbnA2	Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix Single-stranded left-handed beta-helix	LigPlot