PDB ligand accession: NAG
DrugBank: DB00141
PubChem:
ChEMBL:
InChI Key: OVRNDRQMDRJTHS-FMDGEEDCSA-N
SMILES: CC(=O)NC1C(C(C(OC1O)CO)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Organic oxygen compounds
- Class: Organooxygen compounds
- Subclass: Carbohydrates and carbohydrate conjugates
- Class: Organooxygen compounds
- Superclass: Organic oxygen compounds
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
8OPM | Download | Experimental | e8opmA2 e8opmB2 e8opmC1 e8opmA4 e8opmA1 e8opmB4 e8opmB1 e8opmC3 e8opmC4 | S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein jelly-roll Beta domain of coronavirus spike glycoprotein jelly-roll Beta domain of coronavirus spike glycoprotein jelly-roll Beta domain of coronavirus spike glycoprotein | LigPlot |
8OPN | Download | Experimental | e8opnA3 e8opnB3 e8opnC1 e8opnB1 e8opnA2 | jelly-roll jelly-roll jelly-roll S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein | LigPlot |
8OPO | Download | Experimental | e8opoA1 e8opoA3 e8opoB1 e8opoB2 e8opoC2 e8opoC4 e8opoA4 e8opoB3 e8opoC3 | Beta domain of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Beta domain of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Beta domain of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain jelly-roll jelly-roll jelly-roll | LigPlot |
8OHN | Download | Experimental | e8ohnA4 e8ohnB4 e8ohnC2 e8ohnA1 e8ohnA2 e8ohnA4 e8ohnC2 e8ohnA1 e8ohnC2 e8ohnB2 e8ohnB3 e8ohnB1 e8ohnA4 e8ohnB4 e8ohnA4 e8ohnB3 e8ohnC3 e8ohnC1 e8ohnC4 e8ohnB4 e8ohnC2 e8ohnB4 e8ohnC1 e8ohnA3 | Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain jelly-roll Beta domain of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain jelly-roll Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein jelly-roll Beta domain of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain jelly-roll S2 subunit of coronavirus spike glycoprotein jelly-roll Beta domain of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain jelly-roll S2 subunit of coronavirus spike glycoprotein | LigPlot |