PDB ligand accession: NAG
DrugBank: DB00141
PubChem:
ChEMBL:
InChI Key: OVRNDRQMDRJTHS-FMDGEEDCSA-N
SMILES: CC(=O)NC1C(C(C(OC1O)CO)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Organic oxygen compounds
- Class: Organooxygen compounds
- Subclass: Carbohydrates and carbohydrate conjugates
- Class: Organooxygen compounds
- Superclass: Organic oxygen compounds
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6Q04 | Download | Experimental | e6q04A3 e6q04B4 e6q04C3 e6q04A4 e6q04C4 e6q04A1 e6q04A4 e6q04B1 e6q04B2 e6q04B1 e6q04C4 e6q04C1 | jelly-roll jelly-roll jelly-roll Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein | LigPlot |
| 6Q07 | Download | Experimental | e6q07A1 e6q07B4 e6q07C1 e6q07A3 e6q07C3 e6q07A2 e6q07A3 e6q07B1 e6q07B2 e6q07B1 e6q07C3 e6q07C2 | jelly-roll jelly-roll jelly-roll Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein | LigPlot |
| 7YN0 | Download | Experimental | e7yn0A4 e7yn0B3 e7yn0C2 e7yn0A1 e7yn0A3 e7yn0B2 e7yn0B4 e7yn0C4 e7yn0C1 | S2 subunit of coronavirus spike glycoprotein jelly-roll jelly-roll jelly-roll Beta domain of coronavirus spike glycoprotein Beta domain of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein Beta domain of coronavirus spike glycoprotein | LigPlot |
| 4KQZ | Download | Experimental | e4kqzA1 e4kqzB1 | Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain | LigPlot |
| 7YMV | Download | Experimental | e7ymvA3 e7ymvB1 e7ymvC1 e7ymvA4 e7ymvA2 e7ymvB4 e7ymvB3 e7ymvC2 e7ymvC4 | S2 subunit of coronavirus spike glycoprotein jelly-roll S2 subunit of coronavirus spike glycoprotein jelly-roll Beta domain of coronavirus spike glycoprotein Beta domain of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein Beta domain of coronavirus spike glycoprotein jelly-roll | LigPlot |
| 7YMX | Download | Experimental | e7ymxA3 e7ymxB4 e7ymxC2 e7ymxA1 e7ymxA1 e7ymxC4 e7ymxB3 e7ymxB2 e7ymxC3 | S2 subunit of coronavirus spike glycoprotein Beta domain of coronavirus spike glycoprotein jelly-roll jelly-roll jelly-roll Coronavirus spike protein receptor-binding domain jelly-roll S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein | LigPlot |
| 7YMZ | Download | Experimental | e7ymzA1 e7ymzB2 e7ymzB3 e7ymzC2 e7ymzA2 e7ymzA4 e7ymzB4 e7ymzB1 e7ymzC2 e7ymzC1 e7ymzC3 | S2 subunit of coronavirus spike glycoprotein jelly-roll Coronavirus spike protein receptor-binding domain jelly-roll jelly-roll Beta domain of coronavirus spike glycoprotein Beta domain of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein jelly-roll Beta domain of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein | LigPlot |
| 7YMW | Download | Experimental | e7ymwA4 e7ymwB4 e7ymwC1 | S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein Beta domain of coronavirus spike glycoprotein | LigPlot |
| 4KR0 | Download | Experimental | e4kr0A1 e4kr0B1 | beta-propeller-like Coronavirus spike protein receptor-binding domain | LigPlot |
| 6Q05 | Download | Experimental | e6q05A3 e6q05B2 e6q05C4 e6q05A1 e6q05C1 e6q05A4 e6q05A1 e6q05B4 e6q05B3 e6q05B4 e6q05C1 e6q05C2 | jelly-roll jelly-roll jelly-roll Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein | LigPlot |
| 7YMY | Download | Experimental | e7ymyA1 e7ymyB2 e7ymyC3 e7ymyA4 e7ymyB1 e7ymyC1 | S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein jelly-roll jelly-roll jelly-roll | LigPlot |
| 7YMT | Download | Experimental | e7ymtA1 e7ymtB2 e7ymtC4 e7ymtA2 e7ymtB3 e7ymtC3 e7ymtC2 | S2 subunit of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein jelly-roll jelly-roll jelly-roll Beta domain of coronavirus spike glycoprotein S2 subunit of coronavirus spike glycoprotein | LigPlot |
| 6Q06 | Download | Experimental | e6q06A2 e6q06B3 e6q06C3 e6q06A4 e6q06C2 e6q06A3 e6q06A4 e6q06B2 e6q06B1 e6q06B2 e6q06C2 e6q06C1 | jelly-roll jelly-roll jelly-roll Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein Coronavirus spike protein receptor-binding domain Coronavirus spike protein receptor-binding domain S2 subunit of coronavirus spike glycoprotein | LigPlot |