PDB ligand accession: UPG
DrugBank: DB01861
PubChem:
ChEMBL:
InChI Key: HSCJRCZFDFQWRP-JZMIEXBBSA-N
SMILES: C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(C(O3)CO)O)O)O)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Pyrimidine nucleotides
- Subclass: Pyrimidine nucleotide sugars
- Class: Pyrimidine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6C4J | Download | Experimental | e6c4jA1 e6c4jA2 e6c4jA3 e6c4jB3 e6c4jA1 e6c4jA2 e6c4jB1 e6c4jB2 e6c4jB3 e6c4jC1 e6c4jC2 e6c4jC3 e6c4jD3 e6c4jC2 e6c4jD1 e6c4jD2 e6c4jD3 e6c4jE1 e6c4jE2 e6c4jE3 e6c4jF2 e6c4jE1 e6c4jE2 e6c4jE3 e6c4jF1 e6c4jF2 e6c4jF3 e6c4jG1 e6c4jG2 e6c4jG3 e6c4jH3 e6c4jG1 e6c4jG2 e6c4jH1 e6c4jH2 e6c4jH3 e6c4jI1 e6c4jI2 e6c4jI3 e6c4jJ2 e6c4jI1 e6c4jJ1 e6c4jJ2 e6c4jJ3 e6c4jK1 e6c4jK2 e6c4jK3 e6c4jL2 e6c4jK3 e6c4jL1 e6c4jL2 e6c4jL3 | Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like | LigPlot |
| 6C5A | Download | Experimental | e6c5aA1 e6c5aA2 e6c5aA3 e6c5aB3 e6c5aA1 e6c5aA2 e6c5aB1 e6c5aB2 e6c5aB3 e6c5aC1 e6c5aC2 e6c5aC3 e6c5aD1 e6c5aC2 e6c5aD1 e6c5aD2 e6c5aD3 e6c5aE1 e6c5aE2 e6c5aE3 e6c5aF3 e6c5aE1 e6c5aE2 e6c5aE3 e6c5aF1 e6c5aF2 e6c5aF3 | 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like | LigPlot |
| 3KHU | Download | Experimental | e3khuA1 e3khuA2 e3khuA3 e3khuB1 e3khuB2 e3khuB3 e3khuC1 e3khuC2 e3khuC3 e3khuD1 e3khuD2 e3khuD3 e3khuE1 e3khuE2 e3khuE3 e3khuF1 e3khuF2 e3khuF3 | Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like | LigPlot |
| 5TJH | Download | Experimental | e5tjhC1 e5tjhC2 e5tjhC3 e5tjhD2 | 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like | LigPlot |
| 6C5Z | Download | Experimental | e6c5zA1 e6c5zA2 e6c5zA3 e6c5zB2 e6c5zA2 e6c5zB1 e6c5zB2 e6c5zC1 e6c5zC2 e6c5zC3 e6c5zD3 e6c5zC3 e6c5zD1 e6c5zD2 e6c5zD3 e6c5zE1 e6c5zE2 e6c5zE3 e6c5zF1 e6c5zE1 e6c5zE2 e6c5zE3 e6c5zF1 e6c5zF2 e6c5zF3 | Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like | LigPlot |
| 2Q3E | Download | Experimental | e2q3eA1 e2q3eA2 e2q3eA3 e2q3eB2 e2q3eA2 e2q3eA3 e2q3eB1 e2q3eB2 e2q3eB3 e2q3eC1 e2q3eC2 e2q3eC3 e2q3eD2 e2q3eC2 e2q3eD1 e2q3eD2 e2q3eD3 e2q3eE1 e2q3eE2 e2q3eE3 e2q3eF3 e2q3eE1 e2q3eE2 e2q3eE3 e2q3eF1 e2q3eF2 e2q3eF3 e2q3eG1 e2q3eG2 e2q3eG3 e2q3eH1 e2q3eG1 e2q3eG2 e2q3eH1 e2q3eH2 e2q3eH3 e2q3eI1 e2q3eI2 e2q3eI3 e2q3eJ3 e2q3eI1 e2q3eJ1 e2q3eJ2 e2q3eJ3 e2q3eK1 e2q3eK2 e2q3eK3 e2q3eL3 e2q3eK1 e2q3eL1 e2q3eL2 e2q3eL3 | Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like | LigPlot |
| 3TDK | Download | Experimental | e3tdkA1 e3tdkA2 e3tdkA3 e3tdkB2 e3tdkA2 e3tdkA3 e3tdkB1 e3tdkB2 e3tdkB3 e3tdkG1 e3tdkG2 e3tdkG3 e3tdkH2 e3tdkG1 e3tdkG2 e3tdkH1 e3tdkH2 e3tdkH3 e3tdkL1 e3tdkL2 e3tdkL3 e3tdkK3 e3tdkL2 e3tdkL3 e3tdkK1 e3tdkK2 e3tdkK3 e3tdkF1 e3tdkF2 e3tdkF3 e3tdkE1 e3tdkE2 e3tdkE3 e3tdkF1 e3tdkE1 e3tdkE2 e3tdkE3 e3tdkD1 e3tdkD2 e3tdkD3 e3tdkC3 e3tdkD3 e3tdkC1 e3tdkC2 e3tdkC3 e3tdkJ1 e3tdkJ2 e3tdkJ3 e3tdkI3 e3tdkJ1 e3tdkI1 e3tdkI2 e3tdkI3 | Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like | LigPlot |
| 4EDF | Download | Experimental | e4edfA1 e4edfA2 e4edfA3 e4edfD3 e4edfB14 e4edfB1 e4edfB3 e4edfC2 e4edfC14 e4edfB3 e4edfC1 e4edfC2 e4edfA1 e4edfD12 e4edfA2 e4edfD1 e4edfD3 | Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like Rossmann-like 6-phosphogluconate dehydrogenase C-terminal domain-like | LigPlot |