PDB ligand accession: CDL
DrugBank: DB03429
PubChem:
ChEMBL: n/a
InChI Key: XVTUQDWPJJBEHJ-KZCWQMDCSA-L
SMILES: CCCCCCCCCCCCCCCCCC(=O)OCC(COP(=O)([O-])OCC(COP(=O)([O-])OCC(COC(=O)CCCCCCCCCCCCCCCCC)OC(=O)CCCCCCCCCCCCCCCCC)O)OC(=O)CCCCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerophospholipids
- Subclass: Glycerophosphoglycerophosphoglycerols
- Class: Glycerophospholipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 7R3V | Download | Experimental | e7r3vA2 e7r3vC2 e7r3vC2 e7r3vD2 e7r3vF1 e7r3vG1 e7r3vC2 e7r3vF1 e7r3vG1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 5NMI | Download | Experimental | e5nmiC2 e5nmiF1 e5nmiG1 e5nmiC2 e5nmiD2 e5nmiF1 e5nmiG1 e5nmiP2 e5nmiS1 e5nmiT1 | Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6NHG | Download | Experimental | e6nhgA1 e6nhgA2 e6nhgC2 e6nhgJ1 e6nhgK1 e6nhgC2 e6nhgD1 e6nhgF1 e6nhgG1 e6nhgC2 e6nhgF1 e6nhgG1 | LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6ZFU | Download | Experimental | e6zfuA1 e6zfuC2 e6zfuC2 e6zfuF1 e6zfuG1 e6zfuC2 e6zfuD2 e6zfuF1 e6zfuG1 e6zfuC2 e6zfuE2 e6zfuJ1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 4D6U | Download | Experimental | e4d6uC2 e4d6uD1 e4d6uF1 e4d6uG1 e4d6uC2 e4d6uF1 e4d6uG1 e4d6uP2 e4d6uQ1 e4d6uS1 e4d6uT1 e4d6uP2 e4d6uS1 e4d6uT1 | Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6ZFS | Download | Experimental | e6zfsA1 e6zfsC2 e6zfsC2 e6zfsF1 e6zfsG1 e6zfsC2 e6zfsD2 e6zfsF1 e6zfsG1 e6zfsC2 e6zfsE1 e6zfsJ1 e6zfsC1 e6zfsD1 e6zfsG1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c-like Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 5OKD | Download | Experimental | e5okdC1 e5okdF1 e5okdG1 e5okdC1 e5okdD2 e5okdF1 e5okdG1 e5okdC1 e5okdE1 e5okdJ1 | Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6XVF | Download | Experimental | e6xvfA1 e6xvfC2 e6xvfC2 e6xvfF1 e6xvfG1 e6xvfC2 e6xvfD2 e6xvfF1 e6xvfG1 e6xvfC2 e6xvfE2 e6xvfJ1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 1PP9 | Download | Experimental | e1pp9F1 e1pp9C2 e1pp9G1 e1pp9Q2 e1pp9S1 e1pp9P2 e1pp9T1 e1pp9S1 e1pp9P2 e1pp9T1 | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 1SQP | Download | Experimental | e1sqpC2 e1sqpK1 e1sqpA2 e1sqpD2 e1sqpC2 e1sqpG1 e1sqpC2 e1sqpG1 | Transmembrane heme-binding four-helical bundle Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) LuxS, MPP, ThrRS/AlaRS common domain cytochrome c1 transmembrane anchor Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6ZFT | Download | Experimental | e6zftC1 e6zftF1 e6zftG1 e6zftC1 e6zftD2 e6zftF1 e6zftG1 e6zftC1 e6zftE1 e6zftJ1 | Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 2YBB | Download | Experimental | e2ybbC1 e2ybbF1 e2ybbG1 e2ybbc2 e2ybbd2 e2ybbf1 e2ybbg1 e2ybbc2 e2ybbf1 e2ybbg1 | Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6HAW | Download | Experimental | e6hawA2 e6hawC2 e6hawC2 e6hawF1 e6hawG1 e6hawC2 e6hawD1 e6hawF1 e6hawG1 e6hawC2 e6hawE1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor | LigPlot |
| 1PPJ | Download | Experimental | e1ppjF1 e1ppjC2 e1ppjD2 e1ppjG1 e1ppjF1 e1ppjC2 e1ppjG1 e1ppjQ2 e1ppjS1 e1ppjP2 e1ppjT1 e1ppjS1 e1ppjP2 e1ppjT1 | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 4D6T | Download | Experimental | e4d6tC2 e4d6tD1 e4d6tF1 e4d6tG1 e4d6tC2 e4d6tF1 e4d6tG1 e4d6tP2 e4d6tQ2 e4d6tS1 e4d6tT1 e4d6tP2 e4d6tS1 e4d6tT1 | Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 5KLV | Download | Experimental | e5klvA1 e5klvA2 e5klvC2 e5klvJ1 e5klvK1 e5klvC2 e5klvD1 e5klvF1 e5klvG1 e5klvC2 e5klvF1 e5klvG1 | LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 7TAY | Download | Experimental | e7tayA1 e7tayA2 e7tayC2 e7tayJ1 e7tayK1 e7tayC2 e7tayF1 e7tayG1 e7tayC2 e7tayD1 e7tayF1 e7tayG1 | LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 2A06 | Download | Experimental | e2a06C2 e2a06F1 e2a06G1 e2a06D2 e2a06C2 e2a06F1 e2a06G1 e2a06P2 e2a06S1 e2a06T1 e2a06Q2 e2a06P2 e2a06S1 e2a06T1 | Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) cytochrome c1 transmembrane anchor Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) cytochrome c1 transmembrane anchor Transmembrane heme-binding four-helical bundle 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |