PDB ligand accession: PEF
DrugBank: DB01728
PubChem: 445468;11802774;
ChEMBL: n/a
InChI Key: SLKDGVPOSSLUAI-PGUFJCEWSA-N
SMILES: CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerophospholipids
- Subclass: Glycerophosphoethanolamines
- Class: Glycerophospholipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6T15 | Download | Experimental | e6t15A2 e6t15C2 e6t15C2 e6t15N1 e6t15C2 e6t15D1 e6t15E3 e6t15I1 e6t15C1 e6t15G1 e6t15H1 e6t15C2 e6t15N1 e6t15E2 e6t15E3 e6t15J1 e6t15L1 e6t15N1 e6t15N2 e6t15N1 e6t15O1 e6t15P3 e6t15T1 e6t15N2 e6t15R1 e6t15S1 e6t15C2 e6t15N1 e6t15P1 e6t15P3 e6t15U1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Trm112p-like iron-sulfur subunit (ISP) transmembrane anchor Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Trm112p-like iron-sulfur subunit (ISP) transmembrane anchor Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 8EC0 | Download | Experimental | e8ec0A1 e8ec0H1 e8ec0J2 e8ec0C2 e8ec0E1 e8ec0J2 e8ec0L1 e8ec0L2 e8ec0J1 e8ec0J2 e8ec0L2 e8ec0a1 e8ec0c3 e8ec0j2 e8ec0c3 e8ec0e1 e8ec0j2 e8ec0l2 e8ec0j1 e8ec0j2 e8ec0l1 | LuxS, MPP, ThrRS/AlaRS common domain Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor Cytochrome c-like a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Cytochrome c-like LuxS, MPP, ThrRS/AlaRS common domain iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Cytochrome c-like | LigPlot |
| 8E7S | Download | Experimental | e8e7sA1 e8e7sC1 e8e7sJ2 e8e7sL1 e8e7sL2 e8e7sC1 e8e7sJ2 e8e7sL2 e8e7sJ1 e8e7sJ2 e8e7sa1 e8e7sc3 e8e7sj1 e8e7sl1 e8e7sc3 e8e7sj1 e8e7sl1 e8e7sj1 e8e7sj2 e8e7sl2 | LuxS, MPP, ThrRS/AlaRS common domain iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle Cytochrome c-like cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle LuxS, MPP, ThrRS/AlaRS common domain iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor Transmembrane heme-binding four-helical bundle a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c-like | LigPlot |
| 6T0B | Download | Experimental | e6t0bA1 e6t0bC2 e6t0bC2 e6t0bN1 e6t0bC1 e6t0bG1 e6t0bH1 e6t0bC2 e6t0bN1 e6t0bE1 e6t0bE3 e6t0bJ1 e6t0bL2 e6t0bN1 e6t0bN1 e6t0bO2 e6t0bP1 e6t0bT1 e6t0bN1 e6t0bN2 e6t0bR1 e6t0bS1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Trm112p-like Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6HU9 | Download | Experimental | e6hu9A2 e6hu9C2 e6hu9D2 e6hu9E1 e6hu9A2 e6hu9C2 e6hu9J1 e6hu9C2 e6hu9D2 e6hu9E1 e6hu9I1 e6hu9C2 e6hu9E1 e6hu9E3 e6hu9J1 e6hu9N1 e6hu9C1 e6hu9G1 e6hu9H1 e6hu9L1 e6hu9N1 e6hu9N2 e6hu9U1 e6hu9N1 e6hu9O2 e6hu9P2 e6hu9T1 e6hu9C2 e6hu9N1 e6hu9P1 e6hu9P2 e6hu9U1 e6hu9N1 e6hu9N2 e6hu9R1 e6hu9S1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Trm112p-like Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Trm112p-like iron-sulfur subunit (ISP) transmembrane anchor Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |