PDB ligand accession: GDP
DrugBank: DB04315
PubChem: 8977;5280316;135398619;
ChEMBL:
InChI Key: QGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES: c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Purine nucleotides
- Subclass: Purine ribonucleotides
- Class: Purine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
5BMV | Download | Experimental | e5bmvB2 e5bmvD1 | Rossmann-like Rossmann-like | LigPlot |
2WBE | Download | Experimental | e2wbeB2 | Rossmann-like | LigPlot |
1SA0 | Download | Experimental | e1sa0B2 e1sa0D2 | Rossmann-like Rossmann-like | LigPlot |
2HXF | Download | Experimental | e2hxfB2 | Rossmann-like | LigPlot |
6RZA | Download | Experimental | e6rzaB1 e6rzaD2 | Rossmann-like Rossmann-like | LigPlot |
4ZI7 | Download | Experimental | e4zi7B1 e4zi7D2 | Rossmann-like Rossmann-like | LigPlot |
5FNV | Download | Experimental | e5fnvB1 | Rossmann-like | LigPlot |
6CVJ | Download | Experimental | e6cvjB1 e6cvjA1 e6cvjA2 e6cvjC1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
5XXW | Download | Experimental | e5xxwI1 e5xxwB1 e5xxwG2 e5xxwD2 e5xxwK1 e5xxwF2 e5xxwH1 e5xxwJ2 e5xxwL1 e5xxwC1 e5xxwN2 e5xxwA2 e5xxwP2 e5xxwE1 e5xxwE2 e5xxwR1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
3J6G | Download | Experimental | e3j6gB1 e3j6gD1 e3j6gF1 e3j6gH1 e3j6gJ1 e3j6gL1 e3j6gN1 e3j6gP1 e3j6gR1 | Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
1FFX | Download | Experimental | e1ffxB2 e1ffxD2 | Rossmann-like Rossmann-like | LigPlot |
6O2T | Download | Experimental | e6o2t2A1 e6o2t1H1 e6o2t2B2 e6o2t1O1 e6o2t2C1 e6o2t1P2 e6o2t2D1 e6o2t1Q2 e6o2t2E2 e6o2t1R1 e6o2t2F2 e6o2t1S1 e6o2t2G2 e6o2t1T2 e6o2t2I2 e6o2t1U1 e6o2t2J2 e6o2t1V1 e6o2t2K1 e6o2t1W1 e6o2t2L1 e6o2t1X2 e6o2t2M1 e6o2t1Y1 e6o2t2N2 e6o2t1Z2 e6o2t3A1 e6o2t2H2 e6o2t3B2 e6o2t2O2 e6o2t3C1 e6o2t2P1 e6o2t3D1 e6o2t2Q1 e6o2t3E2 e6o2t2R1 e6o2t3F2 e6o2t2S1 e6o2t3G1 e6o2t2T1 e6o2t3I1 e6o2t2U2 e6o2t3J2 e6o2t2V2 e6o2t3K2 e6o2t2W1 e6o2t3L2 e6o2t2X1 e6o2t3M1 e6o2t2Y2 e6o2t3N1 e6o2t2Z1 e6o2t3H1 e6o2t3O2 e6o2t3P1 e6o2t3Q2 e6o2t3R2 e6o2t3S1 e6o2t3T2 e6o2t3U1 e6o2t3V1 e6o2t3W1 e6o2t3X2 e6o2t3Y1 e6o2t3Z2 e6o2t1A2 e6o2t4H2 e6o2t1B1 e6o2t4O1 e6o2t1C2 e6o2t4P1 e6o2t1D1 e6o2t4Q1 e6o2t1E1 e6o2t4R2 e6o2t1F2 e6o2t4S1 e6o2t1G1 e6o2t4T1 e6o2t1I1 e6o2t4U2 e6o2t1J2 e6o2t4V2 e6o2t1K2 e6o2t4W2 e6o2t1L1 e6o2t4X2 e6o2t1M2 e6o2t4Y2 e6o2t1N2 e6o2t4Z1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
7YSO | Download | Experimental | e7ysoB1 | Rossmann-like | LigPlot |
3J6F | Download | Experimental | e3j6fI1 e3j6fB1 e3j6fG1 e3j6fD1 e3j6fK1 e3j6fF1 e3j6fH1 e3j6fJ1 e3j6fL1 e3j6fC1 e3j6fN1 e3j6fA1 e3j6fP1 e3j6fE1 e3j6fE2 e3j6fR1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
5SYE | Download | Experimental | e5syeB1 | Rossmann-like | LigPlot |
3EDL | Download | Experimental | e3edlB2 e3edlG2 | Rossmann-like Rossmann-like | LigPlot |
6EW0 | Download | Experimental | e6ew0E1 e6ew0F2 e6ew0G2 e6ew0C1 e6ew0D2 e6ew0I1 e6ew0A1 e6ew0A2 e6ew0B1 e6ew0H2 | Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
6MZG | Download | Experimental | e6mzgB1 e6mzgD2 e6mzgH2 e6mzgJ1 | Rossmann-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
6MZF | Download | Experimental | e6mzfB1 e6mzfD2 e6mzfI1 e6mzfK1 e6mzfP1 e6mzfR2 e6mzfW2 e6mzfY2 | Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
6RZB | Download | Experimental | e6rzbB1 | Rossmann-like | LigPlot |
1TVK | Download | Experimental | e1tvkB2 | Rossmann-like | LigPlot |
7EMJ | Download | Experimental | e7emjB1 | Rossmann-like | LigPlot |
6LS4 | Download | Experimental | e6ls4B2 | Rossmann-like | LigPlot |
5SYC | Download | Experimental | e5sycB1 | Rossmann-like | LigPlot |
7PQP | Download | Experimental | e7pqpA1 e7pqpC1 e7pqpB2 e7pqpE1 e7pqpD2 e7pqpG1 e7pqpF2 e7pqpI1 e7pqpH2 e7pqpK1 e7pqpJ2 e7pqpM1 e7pqpL1 e7pqpL2 | Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like | LigPlot |
6CVN | Download | Experimental | e6cvnA2 e6cvnC1 e6cvnB2 | Rossmann-like Rossmann-like Bacillus chorismate mutase-like | LigPlot |
3JAR | Download | Experimental | e3jarE1 e3jarE2 e3jarF2 e3jarG2 e3jarC1 e3jarD2 e3jarI2 e3jarA1 e3jarA2 e3jarB1 e3jarH1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
4ZOL | Download | Experimental | e4zolB2 e4zolD1 | Rossmann-like Rossmann-like | LigPlot |
6EVZ | Download | Experimental | e6evzF1 e6evzE1 e6evzG1 e6evzD2 e6evzC1 e6evzI1 e6evzB1 e6evzA1 e6evzA2 e6evzH1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
7RS5 | Download | Experimental | e7rs5G2 e7rs5B2 e7rs5P1 e7rs5P2 e7rs5D1 e7rs5L1 e7rs5L2 e7rs5F2 e7rs5H2 e7rs5A1 e7rs5A2 e7rs5J1 e7rs5M1 e7rs5E1 e7rs5E2 e7rs5O1 e7rs5Q2 e7rs5C1 e7rs5S2 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
7CBZ | Download | Experimental | e7cbzB1 e7cbzD2 | Rossmann-like Rossmann-like | LigPlot |
6ZPI | Download | Experimental | e6zpiB1 | Rossmann-like | LigPlot |
3J6P | Download | Experimental | e3j6pB1 | Rossmann-like | LigPlot |
5MM7 | Download | Experimental | e5mm7B2 | Rossmann-like | LigPlot |
6Y4M | Download | Experimental | e6y4mB2 | Rossmann-like | LigPlot |
7PQC | Download | Experimental | e7pqcA1 e7pqcC1 e7pqcB2 e7pqcE1 e7pqcD2 e7pqcG1 e7pqcF2 e7pqcI1 e7pqcH2 e7pqcK1 e7pqcJ2 e7pqcM1 e7pqcL1 e7pqcL2 | Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like | LigPlot |
5SYF | Download | Experimental | e5syfB2 | Rossmann-like | LigPlot |
5XXV | Download | Experimental | e5xxvI1 e5xxvB1 e5xxvG1 e5xxvD2 e5xxvK2 e5xxvF1 e5xxvH2 e5xxvJ2 e5xxvL2 e5xxvC1 e5xxvN1 e5xxvA1 e5xxvP2 e5xxvE1 e5xxvE2 e5xxvR2 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
5XXT | Download | Experimental | e5xxtB2 e5xxtI2 e5xxtG1 e5xxtD2 e5xxtK2 e5xxtF1 e5xxtH1 e5xxtJ2 e5xxtL2 e5xxtC2 e5xxtN2 e5xxtA1 e5xxtP2 e5xxtE1 e5xxtE2 e5xxtR1 | Rossmann-like Bacillus chorismate mutase-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
7SGS | Download | Experimental | e7sgsB2 e7sgsC2 | Bacillus chorismate mutase-like Rossmann-like | LigPlot |
6MLQ | Download | Experimental | e6mlqB2 | Rossmann-like | LigPlot |
1IA0 | Download | Experimental | e1ia0A3 e1ia0B2 | Bacillus chorismate mutase-like Rossmann-like | LigPlot |
2HXH | Download | Experimental | e2hxhB2 | Rossmann-like | LigPlot |
7YSP | Download | Experimental | e7yspB1 | Rossmann-like | LigPlot |
5KMG | Download | Experimental | e5kmgB2 | Rossmann-like | LigPlot |
3JAS | Download | Experimental | e3jasE1 e3jasE2 e3jasF1 e3jasG2 e3jasC2 e3jasD2 e3jasI1 e3jasA1 e3jasA2 e3jasB2 e3jasH1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
1SA1 | Download | Experimental | e1sa1B2 e1sa1D2 | Rossmann-like Rossmann-like | LigPlot |
6VPO | Download | Experimental | e6vpoB1 | Rossmann-like | LigPlot |
6DPV | Download | Experimental | e6dpvA1 e6dpvB2 e6dpvC1 e6dpvD1 e6dpvE1 e6dpvE2 e6dpvF1 e6dpvG2 e6dpvH2 e6dpvI1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
5MM4 | Download | Experimental | e5mm4B2 | Rossmann-like | LigPlot |
4ZHQ | Download | Experimental | e4zhqB2 e4zhqD2 | Rossmann-like Rossmann-like | LigPlot |
6VPP | Download | Experimental | e6vppB1 | Rossmann-like | LigPlot |
6MLR | Download | Experimental | e6mlrB2 | Rossmann-like | LigPlot |
7EXC | Download | Experimental | e7excB1 | Rossmann-like | LigPlot |
6MZE | Download | Experimental | e6mzeB1 e6mzeD2 e6mzeI1 e6mzeK2 e6mzeP1 e6mzeR2 e6mzeW1 e6mzeY2 | Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
6O2Q | Download | Experimental | e6o2qA1 e6o2qA2 e6o2qB1 e6o2qC2 e6o2qD2 e6o2qE1 e6o2qE2 e6o2qF2 e6o2qG2 e6o2qH2 e6o2qI2 | Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
6Y4N | Download | Experimental | e6y4nB2 | Rossmann-like | LigPlot |
5OGC | Download | Experimental | e5ogcB1 | Rossmann-like | LigPlot |
6O2S | Download | Experimental | e6o2s2A1 e6o2s1H1 e6o2s2B1 e6o2s1O1 e6o2s2C2 e6o2s1P2 e6o2s2D2 e6o2s1Q1 e6o2s2E2 e6o2s1R2 e6o2s2F2 e6o2s1S2 e6o2s2G1 e6o2s1T2 e6o2s2I2 e6o2s1U2 e6o2s2J2 e6o2s1V1 e6o2s2K1 e6o2s1W1 e6o2s2L2 e6o2s1X2 e6o2s2M2 e6o2s1Y1 e6o2s2N2 e6o2s1Z2 e6o2s3A2 e6o2s2H2 e6o2s3B1 e6o2s2O1 e6o2s3C1 e6o2s2P1 e6o2s3D1 e6o2s2Q2 e6o2s3E2 e6o2s2R1 e6o2s3F1 e6o2s2S2 e6o2s3G1 e6o2s2T2 e6o2s3I1 e6o2s2U1 e6o2s3J1 e6o2s2V2 e6o2s3K2 e6o2s2W2 e6o2s3L1 e6o2s2X1 e6o2s3M2 e6o2s2Y2 e6o2s3N1 e6o2s2Z1 e6o2s3H2 e6o2s3O1 e6o2s3P1 e6o2s3Q2 e6o2s3R2 e6o2s3S2 e6o2s3T1 e6o2s3U1 e6o2s3V2 e6o2s3W1 e6o2s3X1 e6o2s3Y2 e6o2s3Z1 e6o2s1A2 e6o2s4H2 e6o2s1B2 e6o2s4O1 e6o2s1C2 e6o2s4P2 e6o2s1D1 e6o2s4Q2 e6o2s1E2 e6o2s4R1 e6o2s1F1 e6o2s4S2 e6o2s1G1 e6o2s4T1 e6o2s1I1 e6o2s4U2 e6o2s1J2 e6o2s4V2 e6o2s1K1 e6o2s4W1 e6o2s1L1 e6o2s4X1 e6o2s1M2 e6o2s4Y1 e6o2s1N1 e6o2s4Z1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
7L05 | Download | Experimental | e7l05B1 e7l05D1 | Rossmann-like Rossmann-like | LigPlot |
1TUB | Download | Experimental | e1tubB2 | Rossmann-like | LigPlot |
5JQG | Download | Experimental | e5jqgB1 | Rossmann-like | LigPlot |
6O2R | Download | Experimental | e6o2rA1 e6o2rA2 e6o2rB2 e6o2rC1 e6o2rD2 e6o2rE1 e6o2rE2 e6o2rF1 e6o2rG1 e6o2rH2 e6o2rI1 | Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
6EVX | Download | Experimental | e6evxF1 e6evxE1 e6evxG2 e6evxD1 e6evxC2 e6evxI1 e6evxA1 e6evxA2 e6evxB1 e6evxH1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like | LigPlot |
5SYG | Download | Experimental | e5sygB1 | Rossmann-like | LigPlot |
7X4N | Download | Experimental | e7x4nB2 | Rossmann-like | LigPlot |
5OAM | Download | Experimental | e5oamB1 | Rossmann-like | LigPlot |
7YHN | Download | Experimental | e7yhnB1 | Rossmann-like | LigPlot |
5OCU | Download | Experimental | e5ocuB2 | Rossmann-like | LigPlot |