PDB ligand accession: GOL
DrugBank: DB09462
PubChem:
ChEMBL:
InChI Key: PEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES: C(C(CO)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Organic oxygen compounds
- Class: Organooxygen compounds
- Subclass: Carbohydrates and carbohydrate conjugates
- Class: Organooxygen compounds
- Superclass: Organic oxygen compounds
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 3QAA | Download | Experimental | e3qaaB1 | cradle loop barrel | LigPlot |
| 1T05 | Download | Experimental | e1t05A4 e1t05A1 | Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases | LigPlot |
| 6ASW | Download | Experimental | e6aswB2 e6aswB3 e6aswC4 e6aswC1 e6aswD3 | Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like | LigPlot |
| 5YOJ | Download | Experimental | e5yojB1 | cradle loop barrel | LigPlot |
| 6O9E | Download | Experimental | e6o9eA3 e6o9eB3 e6o9eC2 e6o9eC3 | Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like | LigPlot |
| 5HP1 | Download | Experimental | e5hp1B2 e5hp1B3 | Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 2IAJ | Download | Experimental | e2iajB2 | Alpha-beta plaits | LigPlot |
| 5D3G | Download | Experimental | e5d3gA3 e5d3gB3 e5d3gB1 e5d3gB2 e5d3gC4 e5d3gD3 e5d3gD1 e5d3gD3 e5d3gC2 e5d3gC3 | Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Alpha-beta plaits helical bundle domain in reverse transcriptase-like polymerases | LigPlot |
| 6AN2 | Download | Experimental | e6an2A4 e6an2B1 e6an2B3 e6an2C2 e6an2D1 e6an2D3 | Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 7LRY | Download | Experimental | e7lryA4 e7lryB3 e7lryB2 e7lryB3 e7lryD1 e7lryD2 e7lryC1 | Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases Ribonuclease H-like Alpha-beta plaits helical bundle domain in reverse transcriptase-like polymerases | LigPlot |
| 3KLE | Download | Experimental | e3kleB2 e3kleB3 e3kleF2 e3kleF3 | Alpha-beta plaits Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like | LigPlot |
| 6AVM | Download | Experimental | e6avmA4 e6avmB1 e6avmB2 e6avmB1 e6avmB2 e6avmC3 e6avmD2 e6avmD2 e6avmD3 | Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 3KLF | Download | Experimental | e3klfB8 e3klfB9 e3klfF8 e3klfF9 | Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 6DTX | Download | Experimental | e6dtxB1 e6dtxB2 | Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 5HLF | Download | Experimental | e5hlfA1 e5hlfB2 e5hlfB3 e5hlfB1 e5hlfB3 e5hlfC3 e5hlfD1 e5hlfD2 | Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases Alpha-beta plaits Ribonuclease H-like | LigPlot |
| 4PQU | Download | Experimental | e4pquA3 e4pquB1 e4pquB3 | Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like | LigPlot |
| 7LRX | Download | Experimental | e7lrxC1 e7lrxB3 e7lrxD1 e7lrxD3 | Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases | LigPlot |
| 1R0A | Download | Experimental | e1r0aB3 e1r0aB1 | Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases | LigPlot |
| 7LSK | Download | Experimental | e7lskD1 e7lskD2 | helical bundle domain in reverse transcriptase-like polymerases Ribonuclease H-like | LigPlot |
| 7LRI | Download | Experimental | e7lriA2 e7lriA3 e7lriA4 e7lriC3 e7lriB1 | Alpha-beta plaits Ribonuclease H-like helical bundle domain in reverse transcriptase-like polymerases Ribonuclease H-like Ribonuclease H-like | LigPlot |
| 6AMO | Download | Experimental | e6amoA4 e6amoB1 e6amoB3 e6amoC1 e6amoD1 e6amoD3 | Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like | LigPlot |
| 7LRM | Download | Experimental | e7lrmA3 e7lrmB2 e7lrmB1 e7lrmB2 e7lrmC3 e7lrmC4 e7lrmD1 e7lrmD3 | Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Alpha-beta plaits helical bundle domain in reverse transcriptase-like polymerases Alpha-beta plaits Ribonuclease H-like | LigPlot |
| 4ZIP | Download | Experimental | e4zipA1 e4zipB1 | cradle loop barrel cradle loop barrel | LigPlot |
| 4DG1 | Download | Experimental | e4dg1A5 e4dg1A7 e4dg1B2 | Ribonuclease H-like Alpha-beta plaits Alpha-beta plaits | LigPlot |
| 6ANQ | Download | Experimental | e6anqB1 e6anqB2 e6anqC4 e6anqD1 e6anqD2 | Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like | LigPlot |
| 4YHQ | Download | Experimental | e4yhqA1 e4yhqA1 e4yhqB1 | cradle loop barrel cradle loop barrel cradle loop barrel | LigPlot |
| 2BE2 | Download | Experimental | e2be2A3 | Ribonuclease H-like | LigPlot |
| 3OK9 | Download | Experimental | e3ok9A1 e3ok9B1 | cradle loop barrel cradle loop barrel | LigPlot |
| 5I3U | Download | Experimental | e5i3uB1 e5i3uB3 | Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 6AVT | Download | Experimental | e6avtA1 e6avtB1 e6avtB3 e6avtB1 e6avtB3 e6avtC2 e6avtD2 e6avtD2 e6avtD3 | Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 2HB3 | Download | Experimental | e2hb3B1 | cradle loop barrel | LigPlot |
| 3NU3 | Download | Experimental | e3nu3B1 | cradle loop barrel | LigPlot |
| 6AN8 | Download | Experimental | e6an8B1 e6an8B3 e6an8C4 e6an8D1 e6an8D2 | Ribonuclease H-like Alpha-beta plaits Ribonuclease H-like Ribonuclease H-like Alpha-beta plaits | LigPlot |
| 4YE3 | Download | Experimental | e4ye3A1 e4ye3B1 | cradle loop barrel cradle loop barrel | LigPlot |