PDB ligand accession: PEF
DrugBank: DB01728
PubChem: 445468;11802774;
ChEMBL: n/a
InChI Key: SLKDGVPOSSLUAI-PGUFJCEWSA-N
SMILES: CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerophospholipids
- Subclass: Glycerophosphoethanolamines
- Class: Glycerophospholipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6T15 | Download | Experimental | e6t15C2 e6t15D1 e6t15E3 e6t15I1 e6t15C2 e6t15N1 e6t15E2 e6t15E3 e6t15J1 e6t15N1 e6t15O1 e6t15P3 e6t15T1 e6t15C2 e6t15N1 e6t15P1 e6t15P3 e6t15U1 | Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Trm112p-like iron-sulfur subunit (ISP) transmembrane anchor Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Trm112p-like iron-sulfur subunit (ISP) transmembrane anchor Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 8EC0 | Download | Experimental | e8ec0C2 e8ec0E1 e8ec0J2 e8ec0L1 e8ec0L2 e8ec0C2 e8ec0H1 e8ec0W1 e8ec0a1 e8ec0c3 e8ec0j2 e8ec0c3 e8ec0e1 e8ec0j2 e8ec0l2 | iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor Cytochrome c-like iron-sulfur subunit (ISP) transmembrane anchor Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Mitochondrial cytochrome c oxidase subunit IV LuxS, MPP, ThrRS/AlaRS common domain iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor | LigPlot |
| 8E7S | Download | Experimental | e8e7sA1 e8e7sC1 e8e7sJ2 e8e7sL1 e8e7sL2 e8e7sC1 e8e7sJ2 e8e7sL2 e8e7sa1 e8e7sc3 e8e7sj1 e8e7sl1 e8e7sc3 e8e7sj1 e8e7sl1 | LuxS, MPP, ThrRS/AlaRS common domain iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle Cytochrome c-like cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor LuxS, MPP, ThrRS/AlaRS common domain iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor | LigPlot |
| 6T0B | Download | Experimental | e6t0bE1 e6t0bE2 e6t0bH1 e6t0ba1 e6t0be1 e6t0bC2 e6t0bN1 e6t0bE1 e6t0bE3 e6t0bJ1 e6t0bN1 e6t0bO2 e6t0bP1 e6t0bT1 | iron-sulfur subunit (ISP) transmembrane anchor ISP domain Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c oxidase subunit I-like Mitochondrial cytochrome c oxidase subunit IV Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Trm112p-like Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |
| 6HU9 | Download | Experimental | e6hu9A2 e6hu9C2 e6hu9D2 e6hu9E1 e6hu9C2 e6hu9D2 e6hu9E1 e6hu9I1 e6hu9C2 e6hu9E1 e6hu9E3 e6hu9J1 e6hu9N1 e6hu9N1 e6hu9O2 e6hu9P2 e6hu9T1 e6hu9C2 e6hu9N1 e6hu9P1 e6hu9P2 e6hu9U1 | LuxS, MPP, ThrRS/AlaRS common domain Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle iron-sulfur subunit (ISP) transmembrane anchor Trm112p-like Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle cytochrome c1 transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Trm112p-like iron-sulfur subunit (ISP) transmembrane anchor Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | LigPlot |