PDB ligand accession: GTP
DrugBank: DB04137
PubChem: 6830;5280317;135398633;
ChEMBL:
InChI Key: XKMLYUALXHKNFT-UUOKFMHZSA-N
SMILES: c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Purine nucleotides
- Subclass: Purine ribonucleotides
- Class: Purine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
3S1R | Download | Experimental | e3s1rA2 e3s1rA6 e3s1rB5 e3s1rB6 e3s1rB7 | second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel N-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase | LigPlot |
2E2H | Download | Experimental | e2e2hA1 e2e2hA3 e2e2hA5 e2e2hB3 e2e2hB1 | central helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase | LigPlot |
1TWC | Download | Experimental | e1twcA4 e1twcA8 e1twcB4 e1twcB7 | cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel | LigPlot |