Ligand name: URIDINE 5'-TRIPHOSPHATE
PDB ligand accession: UTP
DrugBank: DB04005
PubChem: 6133
ChEMBL: CHEMBL336296
InChI Key: PGAVKCOVUIYSFO-XVFCMESISA-N
SMILES: C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Pyrimidine nucleotides
      • Subclass: Pyrimidine ribonucleotides

List of PDB structures and/or AlphaFold models with target protein P08518

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
1TWF	Download	Experimental	e1twfB1 e1twfB2 e1twfA10 e1twfA1	cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel	LigPlot
2YU9	Download	Experimental	e2yu9A5 e2yu9A7 e2yu9B4 e2yu9B5	cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel	LigPlot
2NVZ	Download	Experimental	e2nvzA11 e2nvzA13 e2nvzA15 e2nvzB6 e2nvzB7	central helical domain in RNA-polymerase beta-prime subunit cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase	LigPlot
1R9S	Download	Experimental	e1r9sA10 e1r9sA12 e1r9sB4 e1r9sB5	cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel	LigPlot