PDB ligand accession: DGD
DrugBank: DB03426
PubChem:
ChEMBL: n/a
InChI Key: LDQFLSUQYHBXSX-HXXRYREZSA-N
SMILES: CCCCCCCCCCCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)COC2C(C(C(C(O2)CO)O)O)O)O)O)O)OC(=O)CCCCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerolipids
- Subclass: Glycosylglycerols
- Class: Glycerolipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 8F4F | Download | Experimental | e8f4fA1 e8f4fb1 e8f4fI1 e8f4fO1 e8f4fa1 e8f4fB2 e8f4fi1 e8f4fo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF5 | Download | Experimental | e7rf5A1 e7rf5b1 e7rf5I1 e7rf5O1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8F4J | Download | Experimental | e8f4jA1 e8f4jb1 e8f4jI1 e8f4jO1 e8f4ja1 e8f4jB2 e8f4ji1 e8f4jo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6DHG | Download | Experimental | e6dhgA1 e6dhgb1 e6dhgI1 e6dhgO1 e6dhga1 e6dhgB2 e6dhgi1 e6dhgo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6W1R | Download | Experimental | e6w1rA1 e6w1rb2 e6w1rI1 e6w1rO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF3 | Download | Experimental | e7rf3A1 e7rf3b1 e7rf3I1 e7rf3O1 e7rf3a1 e7rf3B1 e7rf3i1 e7rf3o1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6DHO | Download | Experimental | e6dhoA1 e6dhob1 e6dhoI1 e6dhoO1 e6dhoa1 e6dhoB1 e6dhoi1 e6dhoo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 4V82 | Download | Experimental | e4v82AA1 e4v82AC1 e4v82AI1 e4v82AO1 e4v82BA1 e4v82BC1 e4v82BI1 e4v82BO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6W1O | Download | Experimental | e6w1oA1 e6w1ob1 e6w1oI1 e6w1oO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6W1T | Download | Experimental | e6w1tA1 e6w1tb2 e6w1tI1 e6w1tO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6W1V | Download | Experimental | e6w1vA1 e6w1vb1 e6w1vI1 e6w1vO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF1 | Download | Experimental | e7rf1A1 e7rf1b1 e7rf1I1 e7rf1O1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8F4C | Download | Experimental | e8f4cA1 e8f4cb2 e8f4cI1 e8f4cO1 e8f4ca1 e8f4cB1 e8f4ci1 e8f4co1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF8 | Download | Experimental | e7rf8A1 e7rf8b1 e7rf8I1 e7rf8O1 e7rf8a1 e7rf8B1 e7rf8i1 e7rf8o1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF4 | Download | Experimental | e7rf4A1 e7rf4b1 e7rf4I1 e7rf4O1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6W1Q | Download | Experimental | e6w1qA1 e6w1qb2 e6w1qI1 e6w1qO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6DHH | Download | Experimental | e6dhhA1 e6dhhb1 e6dhhI1 e6dhhO1 e6dhha1 e6dhhB1 e6dhhi1 e6dhho1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8F4G | Download | Experimental | e8f4gA1 e8f4gb2 e8f4gI1 e8f4gO1 e8f4ga1 e8f4gB1 e8f4gi1 e8f4go1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF2 | Download | Experimental | e7rf2A1 e7rf2b1 e7rf2I1 e7rf2O1 e7rf2a1 e7rf2B1 e7rf2i1 e7rf2o1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 4TNJ | Download | Experimental | e4tnjA1 e4tnjC1 e4tnjI1 e4tnjO1 e4tnja1 e4tnjc1 e4tnji1 e4tnjo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6W1P | Download | Experimental | e6w1pA1 e6w1pI1 e6w1pO1 e6w1pb2 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Photosystem II antenna protein-like | LigPlot |
| 8F4K | Download | Experimental | e8f4kA1 e8f4kb2 e8f4kI1 e8f4kO1 e8f4ka1 e8f4kB1 e8f4ki1 e8f4ko1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6W1U | Download | Experimental | e6w1uA1 e6w1ub1 e6w1uI1 e6w1uO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 4IXR | Download | Experimental | e4ixrC1 e4ixrA2 e4ixrO2 e4ixrI1 e4ixrc1 e4ixra2 e4ixro2 e4ixri1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Outer membrane meander beta-barrels Photosystem II reaction center protein I, PsbI Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Outer membrane meander beta-barrels Photosystem II reaction center protein I, PsbI | LigPlot |
| 4TNK | Download | Experimental | e4tnkA1 e4tnkC1 e4tnkI1 e4tnkO1 e4tnka1 e4tnkc1 e4tnki1 e4tnko1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8F4E | Download | Experimental | e8f4eA1 e8f4eb2 e8f4eI1 e8f4eO1 e8f4ea1 e8f4eB1 e8f4ei1 e8f4eo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8F4I | Download | Experimental | e8f4iA1 e8f4ib2 e8f4iI1 e8f4iO1 e8f4ia1 e8f4iB1 e8f4ii1 e8f4io1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8F4D | Download | Experimental | e8f4dA1 e8f4db1 e8f4dI1 e8f4dO1 e8f4da1 e8f4dB2 e8f4di1 e8f4do1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 4TNI | Download | Experimental | e4tniA1 e4tniC1 e4tniI1 e4tniO1 e4tnia1 e4tnic1 e4tnii1 e4tnio1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF7 | Download | Experimental | e7rf7A1 e7rf7b1 e7rf7I1 e7rf7O1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 7RF6 | Download | Experimental | e7rf6A1 e7rf6b1 e7rf6I1 e7rf6O1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6DHF | Download | Experimental | e6dhfA1 e6dhfb1 e6dhfI1 e6dhfO1 e6dhfa1 e6dhfB2 e6dhfi1 e6dhfo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 4V62 | Download | Experimental | e4v62AA1 e4v62AC1 e4v62AI1 e4v62AO1 e4v62BA1 e4v62BC1 e4v62BI1 e4v62BO1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8EZ5 | Download | Experimental | e8ez5A1 e8ez5b1 e8ez5I1 e8ez5O1 e8ez5a1 e8ez5B2 e8ez5i1 e8ez5o1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 8F4H | Download | Experimental | e8f4hA1 e8f4hb1 e8f4hI1 e8f4hO1 e8f4ha1 e8f4hB1 e8f4hi1 e8f4ho1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 4FBY | Download | Experimental | e4fbyC1 e4fbyA1 e4fbyI1 e4fbyO1 e4fbyP1 e4fbyG2 e4fbyf1 e4fbya1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Outer membrane meander beta-barrels Photosystem II reaction center protein I, PsbI | LigPlot |
| 4TNH | Download | Experimental | e4tnhA1 e4tnhC1 e4tnhI1 e4tnhO1 e4tnha1 e4tnhc1 e4tnhi1 e4tnho1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 4IXQ | Download | Experimental | e4ixqA1 e4ixqC1 e4ixqI1 e4ixqO1 e4ixqc1 e4ixqa2 e4ixqo2 e4ixqi1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Outer membrane meander beta-barrels Photosystem II reaction center protein I, PsbI | LigPlot |
| 6DHE | Download | Experimental | e6dheA1 e6dheI1 e6dheO1 e6dheb1 e6dheB2 e6dhea1 e6dhei1 e6dheo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Photosystem II antenna protein-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |
| 6DHP | Download | Experimental | e6dhpA1 e6dhpb2 e6dhpI1 e6dhpO1 e6dhpa1 e6dhpB1 e6dhpi1 e6dhpo1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein I, PsbI Outer membrane meander beta-barrels | LigPlot |