PDB ligand accession: DPO
DrugBank: n/a
PubChem:
ChEMBL: n/a
InChI Key: XPPKVPWEQAFLFU-UHFFFAOYSA-J
SMILES: [O-]P(=O)([O-])OP(=O)([O-])[O-]
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Inorganic compounds
- Superclass: Homogeneous non-metal compounds
- Class: Non-metal oxoanionic compounds
- Subclass: Non-metal pyrophosphates
- Class: Non-metal oxoanionic compounds
- Superclass: Homogeneous non-metal compounds
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
5IPL | Download | Experimental | e5iplC5 e5iplD6 e5iplD8 | cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
6UU9 | Download | Experimental | e6uu9CCC7 e6uu9DDD2 e6uu9DDD8 e6uu9DDD9 | cradle loop barrel alpha/beta-Hammerhead/Barrel-sandwich hybrid cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
6UTV | Download | Experimental | e6utvCCC3 e6utvDDD6 e6utvDDD8 e6utvDDD9 | cradle loop barrel cradle loop barrel alpha/beta-Hammerhead/Barrel-sandwich hybrid second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
6UTW | Download | Experimental | e6utwCCC1 e6utwCCC3 e6utwDDD2 e6utwDDD7 e6utwDDD9 | cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel alpha/beta-Hammerhead/Barrel-sandwich hybrid second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
6UU8 | Download | Experimental | e6uu8CCC3 e6uu8DDD4 e6uu8DDD7 e6uu8DDD9 | cradle loop barrel alpha/beta-Hammerhead/Barrel-sandwich hybrid cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
6UTZ | Download | Experimental | e6utzCCC5 e6utzCCC10 e6utzDDD3 e6utzDDD6 e6utzDDD8 | cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase alpha/beta-Hammerhead/Barrel-sandwich hybrid cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
6UU5 | Download | Experimental | e6uu5CCC9 e6uu5DDD1 e6uu5DDD2 e6uu5DDD9 | cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel alpha/beta-Hammerhead/Barrel-sandwich hybrid | LigPlot |