PDB ligand accession: UTP
DrugBank: DB04005
PubChem:
ChEMBL:
InChI Key: PGAVKCOVUIYSFO-XVFCMESISA-N
SMILES: C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Pyrimidine nucleotides
- Subclass: Pyrimidine ribonucleotides
- Class: Pyrimidine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
6UU6 | Download | Experimental | e6uu6CCC1 e6uu6CCC8 e6uu6DDD1 e6uu6DDD2 e6uu6DDD5 e6uu6DDD7 | cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel alpha/beta-Hammerhead/Barrel-sandwich hybrid central helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
6UUB | Download | Experimental | e6uubCCC9 e6uubDDD1 e6uubDDD4 e6uubDDD7 e6uubDDD8 | cradle loop barrel first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit | LigPlot |