PDB ligand accession: DGD
DrugBank: DB03426
PubChem:
ChEMBL: n/a
InChI Key: LDQFLSUQYHBXSX-HXXRYREZSA-N
SMILES: CCCCCCCCCCCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)COC2C(C(C(C(O2)CO)O)O)O)O)O)O)OC(=O)CCCCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerolipids
- Subclass: Glycosylglycerols
- Class: Glycerolipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6JLM | Download | Experimental | e6jlmD1 e6jlmE1 e6jlmF1 e6jlmR1 e6jlmB2 e6jlmD1 e6jlmE1 e6jlmH1 e6jlmd1 e6jlme1 e6jlmf1 e6jlmb1 e6jlmd1 e6jlme1 e6jlmh1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 7EDA | Download | Experimental | e7edaB2 e7edaD1 e7edaE1 e7edaH1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 5GTH | Download | Experimental | e5gthb2 e5gthd1 e5gthe1 e5gthh1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 6JLP | Download | Experimental | e6jlpB2 e6jlpD1 e6jlpE1 e6jlpH1 e6jlpD1 e6jlpE1 e6jlpF1 e6jlpR1 e6jlpd1 e6jlpe1 e6jlpf1 e6jlpb1 e6jlpd1 e6jlpe1 e6jlph1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 4UB8 | Download | Experimental | e4ub8D1 e4ub8E1 e4ub8F1 e4ub8R1 e4ub8B2 e4ub8D1 e4ub8E1 e4ub8H1 e4ub8d1 e4ub8e1 e4ub8b2 e4ub8d1 e4ub8e1 e4ub8h1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 6JLJ | Download | Experimental | e6jljD1 e6jljE1 e6jljF1 e6jljR1 e6jljB2 e6jljD1 e6jljE1 e6jljH1 e6jljd1 e6jlje1 e6jljf1 e6jljb1 e6jljd1 e6jlje1 e6jljh1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 7CJJ | Download | Experimental | e7cjjb1 e7cjjd1 e7cjje1 e7cjjh1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 6JLN | Download | Experimental | e6jlnD1 e6jlnE1 e6jlnF1 e6jlnR1 e6jlnB1 e6jlnD1 e6jlnE1 e6jlnH1 e6jlnd1 e6jlne1 e6jlnf1 e6jlnb1 e6jlnd1 e6jlne1 e6jlnh1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 6JLO | Download | Experimental | e6jloD1 e6jloE1 e6jloR1 e6jloB2 e6jloD1 e6jloE1 e6jloH1 e6jlod1 e6jloe1 e6jlof1 e6jlob1 e6jlod1 e6jloe1 e6jloh1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 8GN0 | Download | Experimental | e8gn0F1 e8gn0D1 e8gn0E1 e8gn0B1 e8gn0H1 e8gn0D1 e8gn0E1 e8gn0d1 e8gn0b1 e8gn0e1 e8gn0h1 | Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 4IL6 | Download | Experimental | e4il6E1 e4il6e1 | Cytochrome b559 subunits Cytochrome b559 subunits | LigPlot |
| 5WS5 | Download | Experimental | e5ws5B2 e5ws5D1 e5ws5E1 e5ws5H1 e5ws5b1 e5ws5d1 e5ws5e1 e5ws5h1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 3WU2 | Download | Experimental | e3wu2D1 e3wu2E1 e3wu2F1 e3wu2B2 e3wu2D1 e3wu2E1 e3wu2H1 e3wu2d1 e3wu2e1 e3wu2f1 e3wu2b2 e3wu2d1 e3wu2e1 e3wu2h1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 4UB6 | Download | Experimental | e4ub6D1 e4ub6E1 e4ub6F1 e4ub6R1 e4ub6B2 e4ub6D1 e4ub6E1 e4ub6H1 e4ub6d1 e4ub6e1 e4ub6f1 e4ub6b2 e4ub6d1 e4ub6e1 e4ub6h1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 6JLK | Download | Experimental | e6jlkD1 e6jlkE1 e6jlkF1 e6jlkR1 e6jlkB2 e6jlkD1 e6jlkE1 e6jlkH1 e6jlkd1 e6jlke1 e6jlkf1 e6jlkb2 e6jlkd1 e6jlke1 e6jlkh1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 8GN2 | Download | Experimental | e8gn2E1 e8gn2D1 e8gn2F1 e8gn2R1 e8gn2E1 e8gn2B2 e8gn2D1 e8gn2H1 e8gn2b1 e8gn2d1 e8gn2e1 e8gn2h1 | Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II protein Y, psbY Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 5B66 | Download | Experimental | e5b66D1 e5b66E1 e5b66F1 e5b66B1 e5b66D1 e5b66E1 e5b66H1 e5b66d1 e5b66e1 e5b66f1 e5b66b2 e5b66d1 e5b66e1 e5b66h1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 5B5E | Download | Experimental | e5b5eD1 e5b5eE1 e5b5eF1 e5b5eB2 e5b5eD1 e5b5eE1 e5b5eH1 e5b5ed1 e5b5ee1 e5b5ef1 e5b5eb2 e5b5ed1 e5b5ee1 e5b5eh1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 5GTI | Download | Experimental | e5gtiB2 e5gtiD1 e5gtiE1 e5gtiH1 e5gtib2 e5gtid1 e5gtie1 e5gtih1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 5WS6 | Download | Experimental | e5ws6B1 e5ws6D1 e5ws6E1 e5ws6H1 e5ws6b1 e5ws6d1 e5ws6e1 e5ws6h1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 5V2C | Download | Experimental | e5v2cD1 e5v2cE1 e5v2cF1 e5v2cB1 e5v2cD1 e5v2cE1 e5v2cH1 e5v2cd1 e5v2ce1 e5v2cf1 e5v2cb2 e5v2cd1 e5v2ce1 e5v2ch1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 7CJI | Download | Experimental | e7cjib2 e7cjid1 e7cjie1 e7cjih1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 8GN1 | Download | Experimental | e8gn1R1 e8gn1D1 e8gn1E1 e8gn1F1 e8gn1B1 e8gn1D1 e8gn1E1 e8gn1H1 e8gn1b2 e8gn1d1 e8gn1e1 e8gn1h1 | Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 6JLL | Download | Experimental | e6jllD1 e6jllE1 e6jllF1 e6jllR1 e6jllB1 e6jllD1 e6jllE1 e6jllH1 e6jlld1 e6jlle1 e6jllf1 e6jllb2 e6jlld1 e6jlle1 e6jllh1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |
| 7COU | Download | Experimental | e7coub1 e7coud1 e7coue1 e7couh1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II 10 kDa phosphoprotein PsbH | LigPlot |