PDB ligand accession: DCT
DrugBank: n/a
PubChem:
ChEMBL:
InChI Key: ARLKCWCREKRROD-POYBYMJQSA-N
SMILES: C1CC(OC1COP(=O)(O)OP(=O)(O)OP(=O)(O)O)N2C=CC(=NC2=O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Pyrimidine nucleotides
- Subclass: Pyrimidine deoxyribonucleotides
- Class: Pyrimidine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 4BWJ | Download | Experimental | e4bwjA1 e4bwjA2 e4bwjA3 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
| 4BWM | Download | Experimental | e4bwmA1 e4bwmA3 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I Alpha-beta plaits | LigPlot |
| 4DLG | Download | Experimental | e4dlgA1 e4dlgA2 e4dlgA3 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
| 4DLE | Download | Experimental | e4dleA10 e4dleA11 e4dleA12 | "fingers" domain in bacteriophage RB69-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I Alpha-beta plaits | LigPlot |
| 2KTQ | Download | Experimental | e2ktqA6 e2ktqA7 e2ktqA2 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I Alpha-beta plaits "fingers" domain in bacteriophage RB69-like DNA polymerase I | LigPlot |
| 3KTQ | Download | Experimental | e3ktqA1 e3ktqA2 e3ktqA3 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
| 3PY8 | Download | Experimental | e3py8A1 e3py8A2 e3py8A3 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
| 4N5S | Download | Experimental | e4n5sA1 e4n5sA2 e4n5sA3 | Alpha-beta plaits helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I | LigPlot |