PDB ligand accession: DGT
DrugBank: DB02181
PubChem: 65103;5280333;135398599;
ChEMBL:
InChI Key: HAAZLUGHYHWQIW-KVQBGUIXSA-N
SMILES: c1nc2c(n1C3CC(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)N=C(NC2=O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Purine nucleotides
- Subclass: Purine deoxyribonucleotides
- Class: Purine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
5YTH | Download | Experimental | e5ythA2 e5ythA3 e5ythA4 | Alpha-beta plaits "fingers" domain in bacteriophage RB69-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I | LigPlot |
5YTF | Download | Experimental | e5ytfA2 e5ytfA3 e5ytfA4 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
5YTG | Download | Experimental | e5ytgA1 e5ytgA3 e5ytgA4 | Alpha-beta plaits "fingers" domain in bacteriophage RB69-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I | LigPlot |
5YTD | Download | Experimental | e5ytdA1 e5ytdA2 e5ytdA4 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I Alpha-beta plaits "fingers" domain in bacteriophage RB69-like DNA polymerase I | LigPlot |
5Z3N | Download | Experimental | e5z3nA1 e5z3nA3 e5z3nA4 | Alpha-beta plaits helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I | LigPlot |