Ligand name: (4S)-2-METHYL-2,4-PENTANEDIOL
PDB ligand accession: MPD
DrugBank: DB03564
PubChem: 5288834
ChEMBL: n/a
InChI Key: SVTBMSDMJJWYQN-YFKPBYRVSA-N
SMILES: CC(CC(C)(C)O)O
Drug action: n/a

ClassyFire chemical classification:

List of PDB structures and/or AlphaFold models with target protein P21853

PDB/AF Accession PyMOL script Experimental / Predicted Interacting ECOD domains ECOD X-group name LigPlot
1UBL Download Experimental e1ublS3
Flavodoxin-like
LigPlot
4U9H Download Experimental e4u9hS2
e4u9hL2
Flavodoxin-like
alpha-helical domain in nickel-iron hydrogenase, large subunit
LigPlot
1WUI Download Experimental e1wuiS2
Flavodoxin-like
LigPlot
1WUL Download Experimental e1wulL2
e1wulS1
alpha-helical domain in nickel-iron hydrogenase, large subunit
Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
LigPlot
1UBK Download Experimental e1ubkS2
e1ubkS2
e1ubkL2
Flavodoxin-like
Flavodoxin-like
alpha-helical domain in nickel-iron hydrogenase, large subunit
LigPlot
5Y4N Download Experimental e5y4nS2
Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
LigPlot
4U9I Download Experimental e4u9iS2
Flavodoxin-like
LigPlot
5XLE Download Experimental e5xleS2
e5xleL1
e5xleS1
e5xleL3
Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
alpha-helical domain in nickel-iron hydrogenase, large subunit
Flavodoxin-like
all-beta domain in nickel-iron hydrogenase large subunit
LigPlot
1UBH Download Experimental e1ubhS2
e1ubhL2
Flavodoxin-like
alpha-helical domain in nickel-iron hydrogenase, large subunit
LigPlot
5XLG Download Experimental e5xlgS1
Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
LigPlot
5XLH Download Experimental e5xlhS1
Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
LigPlot
1WUH Download Experimental e1wuhS2
Flavodoxin-like
LigPlot
8W6X Download Experimental e8w6xS2
Flavodoxin-like
LigPlot
5XLF Download Experimental e5xlfS1
e5xlfS2
e5xlfL4
Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
Flavodoxin-like
all-beta domain in nickel-iron hydrogenase large subunit
LigPlot
1UBM Download Experimental e1ubmS2
Flavodoxin-like
LigPlot