Ligand name: Semaglutide
PDB ligand accession: n/a
DrugBank: DB13928
InChI Key:
SMILES: CC[C@H](C)[C@H](NC(=O)[C@H](CC1=CC=CC=C1)NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](CCCCNC(=O)COCCOCCNC(=O)COCCOCCNC(=O)CC[C@@H](NC(=O)CCCCCCCCCCCCCCCCC(O)=O)C(O)=O)NC(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)[C@H](CCC(N)=O)NC(=O)CNC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC1=CC=C(O)C=C1)NC(=O)[C@H](CO)NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)[C@H](CC1=CC=CC=C1)NC(=O)[C@@H](NC(=O)CNC(=O)[C@H](CCC(O)=O)NC(=O)C(C)(C)NC(=O)[C@@H](N)CC1=CN=CN1)[C@@H](C)O)[C@@H](C)O)C(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](CC1=CNC2=C1C=CC=C2)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCCNC(N)=N)C(=O)NCC(=O)N[C@@H](CCCNC(N)=N)C(=O)NCC(O)=O
Drug action: agonist

List of PDB structures and/or AlphaFold models with target protein P43220

PDB/AF Accession PyMOL script Experimental / Predicted Interacting ECOD domains ECOD X-group name
P43220 Download Predicted P43220_F1_nD2
P43220_F1_nD1
Family A G protein-coupled receptor-like
Hormone receptor domain (HRM, Pfam 02793)
3C59   Predicted e3c59A1
 
3C5T   Predicted e3c5tA1
 
3IOL   Predicted e3iolA1
 
4ZGM   Predicted e4zgmA1
 
5E94   Predicted e5e94G1
e5e94H1
 
5NX2   Predicted e5nx2A2
e5nx2A1
 
5OTT   Predicted e5ottA1
 
5OTU   Predicted e5otuA1
e5otuC1
 
5OTV   Predicted e5otvA1
e5otvC1
 
5OTW   Predicted e5otwC1
e5otwA1
 
5OTX   Predicted e5otxA1
e5otxC1
 
5VEW   Predicted e5vewA2
e5vewB1
 
5VEX   Predicted e5vexA2
e5vexB1
 
6B3J   Predicted e6b3jR2
e6b3jR1
 
6GB1   Predicted e6gb1A1
 
6ORV   Predicted e6orvRP1