PDB ligand accession: PL9
DrugBank: n/a
PubChem:
ChEMBL: n/a
InChI Key: FKUYMLZIRPABFK-UHFFFAOYSA-N
SMILES: CC1=C(C(=O)C(=CC1=O)CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C)C
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Prenol lipids
- Subclass: Quinone and hydroquinone lipids
- Class: Prenol lipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6JLM | Download | Experimental | e6jlmA1 e6jlmD1 e6jlmF1 e6jlmX1 e6jlmA1 e6jlmD1 e6jlmL1 e6jlmT1 e6jlma1 e6jlmd1 e6jlmf1 e6jlmx1 e6jlma1 e6jlmd1 e6jlml1 e6jlmt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 7EDA | Download | Experimental | e7edaA1 e7edaD1 e7edaF1 e7edaX1 e7edaA1 e7edaD1 e7edaL1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL | LigPlot |
| 6JLP | Download | Experimental | e6jlpA1 e6jlpD1 e6jlpF1 e6jlpX1 e6jlpA1 e6jlpD1 e6jlpL1 e6jlpT1 e6jlpa1 e6jlpd1 e6jlpf1 e6jlpx1 e6jlpa1 e6jlpd1 e6jlpl1 e6jlpt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 4UB8 | Download | Experimental | e4ub8A1 e4ub8D1 e4ub8F1 e4ub8X1 e4ub8A1 e4ub8D1 e4ub8L1 e4ub8T1 e4ub8a1 e4ub8d1 e4ub8f1 e4ub8x1 e4ub8a1 e4ub8d1 e4ub8l1 e4ub8t1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLJ | Download | Experimental | e6jljA1 e6jljD1 e6jljF1 e6jljX1 e6jljA1 e6jljD1 e6jljL1 e6jljT1 e6jlja1 e6jljd1 e6jljf1 e6jljx1 e6jlja1 e6jljd1 e6jljl1 e6jljt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 7D1U | Download | Experimental | e7d1uA1 e7d1uD1 e7d1uF1 e7d1uX1 e7d1uA1 e7d1uD1 e7d1uL1 e7d1uT1 e7d1ua1 e7d1ud1 e7d1uf1 e7d1ux1 e7d1ua1 e7d1ud1 e7d1ul1 e7d1ut1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 7CJJ | Download | Experimental | e7cjjA1 e7cjjD1 e7cjjF1 e7cjjX1 e7cjjA1 e7cjjD1 e7cjjL1 e7cjjT1 e7cjja1 e7cjjd1 e7cjjf1 e7cjjx1 e7cjja1 e7cjjd1 e7cjjl1 e7cjjt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 7D1T | Download | Experimental | e7d1tA1 e7d1tD1 e7d1tF1 e7d1tX1 e7d1tA1 e7d1tD1 e7d1tL1 e7d1tT1 e7d1ta1 e7d1td1 e7d1tf1 e7d1tx1 e7d1ta1 e7d1td1 e7d1tl1 e7d1tt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLN | Download | Experimental | e6jlnA1 e6jlnD1 e6jlnF1 e6jlnX1 e6jlnA1 e6jlnD1 e6jlnL1 e6jlnT1 e6jlna1 e6jlnd1 e6jlnf1 e6jlnx1 e6jlna1 e6jlnd1 e6jlnl1 e6jlnt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLO | Download | Experimental | e6jloA1 e6jloD1 e6jloF1 e6jloX1 e6jloA1 e6jloD1 e6jloL1 e6jloT1 e6jloa1 e6jlod1 e6jlof1 e6jlox1 e6jloa1 e6jlod1 e6jlol1 e6jlot1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 8GN0 | Download | Experimental | e8gn0A1 e8gn0F1 e8gn0X1 e8gn0D1 e8gn0A1 e8gn0L1 e8gn0T1 e8gn0D1 e8gn0d1 e8gn0a1 e8gn0l1 e8gn0t1 e8gn0d1 e8gn0a1 e8gn0f1 e8gn0x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 4IL6 | Download | Experimental | e4il6A1 e4il6F1 e4il6A1 e4il6L1 e4il6a2 e4il6f1 e4il6a2 e4il6l1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL | LigPlot |
| 3WU2 | Download | Experimental | e3wu2A1 e3wu2D1 e3wu2F1 e3wu2X1 e3wu2A1 e3wu2D1 e3wu2L1 e3wu2T1 e3wu2a1 e3wu2d1 e3wu2f1 e3wu2x1 e3wu2a1 e3wu2d1 e3wu2l1 e3wu2t1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLK | Download | Experimental | e6jlkA1 e6jlkD1 e6jlkF1 e6jlkX1 e6jlkA1 e6jlkD1 e6jlkL1 e6jlkT1 e6jlka1 e6jlkd1 e6jlkf1 e6jlkx1 e6jlka1 e6jlkd1 e6jlkl1 e6jlkt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 8GN2 | Download | Experimental | e8gn2A1 e8gn2D1 e8gn2F1 e8gn2X1 e8gn2A1 e8gn2D1 e8gn2L1 e8gn2T1 e8gn2a1 e8gn2d1 e8gn2f1 e8gn2x1 e8gn2a1 e8gn2d1 e8gn2l1 e8gn2t1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 5B66 | Download | Experimental | e5b66A1 e5b66D1 e5b66F1 e5b66X1 e5b66A1 e5b66D1 e5b66L1 e5b66T1 e5b66a1 e5b66d1 e5b66f1 e5b66x1 e5b66a1 e5b66d1 e5b66l1 e5b66t1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 5B5E | Download | Experimental | e5b5eA1 e5b5eD1 e5b5eF1 e5b5eX1 e5b5eA1 e5b5eD1 e5b5eL1 e5b5eT1 e5b5ea1 e5b5ed1 e5b5ef1 e5b5ex1 e5b5ea1 e5b5ed1 e5b5el1 e5b5et1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 5V2C | Download | Experimental | e5v2cA1 e5v2cD1 e5v2cF1 e5v2cX1 e5v2cA1 e5v2cD1 e5v2cL1 e5v2cT1 e5v2ca1 e5v2cd1 e5v2cf1 e5v2cx1 e5v2ca1 e5v2cd1 e5v2cl1 e5v2ct1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 7CJI | Download | Experimental | e7cjiA1 e7cjiD1 e7cjiF1 e7cjiX1 e7cjiA1 e7cjiD1 e7cjiL1 e7cjiT1 e7cjia1 e7cjid1 e7cjif1 e7cjix1 e7cjia1 e7cjid1 e7cjil1 e7cjit1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 8GN1 | Download | Experimental | e8gn1A1 e8gn1D1 e8gn1F1 e8gn1X1 e8gn1A1 e8gn1D1 e8gn1L1 e8gn1T1 e8gn1a1 e8gn1d1 e8gn1l1 e8gn1t1 e8gn1a1 e8gn1d1 e8gn1f1 e8gn1x1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 6JLL | Download | Experimental | e6jllA1 e6jllD1 e6jllF1 e6jllX1 e6jllA1 e6jllD1 e6jllL1 e6jllT1 e6jlla1 e6jlld1 e6jllf1 e6jllx1 e6jlla1 e6jlld1 e6jlll1 e6jllt1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |
| 7COU | Download | Experimental | e7couA1 e7couD1 e7couF1 e7couX1 e7couA1 e7couD1 e7couL1 e7couT1 e7coua1 e7coud1 e7couf1 e7coux1 e7coua1 e7coud1 e7coul1 e7cout1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein T, PsbT | LigPlot |