PDB ligand accession: SQD
DrugBank: n/a
PubChem:
ChEMBL:
InChI Key: RVUUQPKXGDTQPG-JUDHQOGESA-N
SMILES: CCCCCCCCCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)CS(=O)(=O)O)O)O)O)OC(=O)CCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerolipids
- Subclass: Glycosylglycerols
- Class: Glycerolipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6JLM | Download | Experimental | e6jlmA1 e6jlmb1 e6jlmT1 e6jlma1 e6jlmc1 e6jlmd1 e6jlmj1 e6jlmk1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 7EDA | Download | Experimental | e7edaA1 e7edaC1 e7edaD1 e7edaK1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein K, PsbK | LigPlot |
| 6JLP | Download | Experimental | e6jlpA1 e6jlpb1 e6jlpT1 e6jlpa1 e6jlpc1 e6jlpd1 e6jlpj1 e6jlpk1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 4UB8 | Download | Experimental | e4ub8A1 e4ub8b2 e4ub8T1 e4ub8a1 e4ub8c1 e4ub8d1 e4ub8j1 e4ub8k1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 6JLJ | Download | Experimental | e6jljA1 e6jljT1 e6jljb1 e6jljc1 e6jljj1 e6jlja1 e6jljd1 e6jljk1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II reaction center protein J, PsbJ Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein K, PsbK | LigPlot |
| 7D1U | Download | Experimental | e7d1uA1 e7d1ub1 e7d1uh1 e7d1uT1 e7d1ua1 e7d1uB2 e7d1uH1 e7d1ut1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT | LigPlot |
| 7CJJ | Download | Experimental | e7cjjA1 e7cjjb1 e7cjjT1 e7cjja1 e7cjjB1 e7cjjt1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 7CZL | Download | Experimental | e7czlA1 e7czlb2 e7czlh1 e7czlT1 e7czlA1 e7czlC1 e7czlD1 e7czlK1 e7czla1 e7czlB2 e7czlH1 e7czlt1 e7czla1 e7czlc1 e7czld1 e7czlk1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein K, PsbK Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein K, PsbK | LigPlot |
| 7D1T | Download | Experimental | e7d1tA1 e7d1tT1 e7d1tb2 e7d1tB1 e7d1ta1 e7d1tt1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 6JLN | Download | Experimental | e6jlnA1 e6jlnb1 e6jlnT1 e6jlna1 e6jlnc1 e6jlnd1 e6jlnj1 e6jlnk1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 6JLO | Download | Experimental | e6jloA1 e6jlob1 e6jloT1 e6jloa1 e6jloB2 e6jlot1 e6jloa1 e6jloc1 e6jlod1 e6jloj1 e6jlok1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 8GN0 | Download | Experimental | e8gn0A1 e8gn0K1 e8gn0C1 e8gn0D1 e8gn0J1 e8gn0c1 e8gn0d1 e8gn0j1 e8gn0a1 e8gn0k1 e8gn0A1 e8gn0T1 e8gn0b1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein K, PsbK Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein K, PsbK Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like | LigPlot |
| 4IL6 | Download | Experimental | e4il6A1 e4il6a2 e4il6a2 e4il6j1 | Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ | LigPlot |
| 3WU2 | Download | Experimental | e3wu2A1 e3wu2b2 e3wu2T1 e3wu2a1 e3wu2c1 e3wu2d1 e3wu2j1 e3wu2k1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 6JLK | Download | Experimental | e6jlkA1 e6jlkb2 e6jlkT1 e6jlka1 e6jlkc1 e6jlkd1 e6jlkj1 e6jlkk1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 8GN2 | Download | Experimental | e8gn2A1 e8gn2b1 e8gn2T1 e8gn2a1 e8gn2c1 e8gn2d1 e8gn2j1 e8gn2k1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 5B66 | Download | Experimental | e5b66A1 e5b66b2 e5b66h1 e5b66T1 e5b66a1 e5b66c1 e5b66d1 e5b66j1 e5b66k1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 5B5E | Download | Experimental | e5b5eA1 e5b5eb2 e5b5eT1 e5b5ea1 e5b5eB2 e5b5et1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 7DXH | Download | Experimental | e7dxha1 e7dxht1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 7DXA | Download | Experimental | e7dxaa1 e7dxat1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 5V2C | Download | Experimental | e5v2cA1 e5v2cI1 e5v2ca1 e5v2ci1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein I, PsbI Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein I, PsbI | LigPlot |
| 7CJI | Download | Experimental | e7cjiA1 e7cjiT1 e7cjib2 e7cjiA1 e7cjiD1 e7cjiK1 e7cjiC1 e7cjiJ1 e7cjiB2 e7cjia1 e7cjit1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein K, PsbK Photosystem II antenna protein-like Photosystem II reaction center protein J, PsbJ Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein T, PsbT | LigPlot |
| 8GN1 | Download | Experimental | e8gn1A1 e8gn1b2 e8gn1h1 e8gn1T1 e8gn1a1 e8gn1c1 e8gn1d1 e8gn1j1 e8gn1k1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II 10 kDa phosphoprotein PsbH Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 6JLL | Download | Experimental | e6jllA1 e6jllb2 e6jllT1 e6jlla1 e6jllc1 e6jlld1 e6jllj1 e6jllk1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK | LigPlot |
| 7COU | Download | Experimental | e7couA1 e7coub1 e7couT1 e7couA1 e7couD1 e7couJ1 e7couK1 e7coua1 e7couB1 e7cout1 | Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein K, PsbK Bacterial photosystem II reaction centre L and M subunits-like Photosystem II antenna protein-like Photosystem II reaction center protein T, PsbT | LigPlot |