Ligand name: GUANOSINE-5'-DIPHOSPHATE
PDB ligand accession: GDP
DrugBank: DB04315
PubChem: 8977;5280316;135398619;
ChEMBL: CHEMBL384759
InChI Key: QGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES: c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Purine nucleotides
      • Subclass: Purine ribonucleotides

List of drug binding-associated PTMs

List of PDB structures and/or AlphaFold models with target protein P60953

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
6TKZ	Download	Experimental	e6tkzA1 e6tkzC1 e6tkzB2 e6tkzD1	Repetitive alpha hairpins P-loop domains-like Repetitive alpha hairpins P-loop domains-like	LigPlot
1A4R	Download	Experimental	e1a4rA1	P-loop domains-like	LigPlot
3QBV	Download	Experimental	e3qbvA1 e3qbvC1	P-loop domains-like P-loop domains-like	LigPlot
5HZK	Download	Experimental	e5hzkA1 e5hzkC1	P-loop domains-like P-loop domains-like	LigPlot
4DID	Download	Experimental	e4didA1	P-loop domains-like	LigPlot
7S0Y	Download	Experimental	e7s0yB1	P-loop domains-like	LigPlot
2WMN	Download	Experimental	e2wmnA1 e2wmnA2 e2wmnA3 e2wmnB1	Barrel domain in dedicator of cytokinesis protein 9 Repetitive alpha hairpins Repetitive alpha hairpins P-loop domains-like	LigPlot
4ITR	Download	Experimental	e4itrC1 e4itrB1 e4itrA1 e4itrD1	P-loop domains-like Fic-like Fic-like P-loop domains-like	LigPlot
2NGR	Download	Experimental	e2ngrA1	P-loop domains-like	LigPlot
1DOA	Download	Experimental	e1doaA1	P-loop domains-like	LigPlot
6SIU	Download	Experimental	e6siuB1 e6siuC1 e6siuA1 e6siuD1	Fic-like P-loop domains-like Fic-like P-loop domains-like	LigPlot
1AN0	Download	Experimental	e1an0A1 e1an0B1	P-loop domains-like P-loop domains-like	LigPlot
1GRN	Download	Experimental	e1grnA1 e1grnB1	P-loop domains-like GTPase activation domain, GAP	LigPlot