Ligand name: GUANOSINE-5'-DIPHOSPHATE
PDB ligand accession: GDP
DrugBank: DB04315
PubChem: 8977;5280316;135398619;
ChEMBL: CHEMBL384759
InChI Key: QGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES: c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Purine nucleotides
      • Subclass: Purine ribonucleotides

List of drug binding-associated PTMs

List of PDB structures and/or AlphaFold models with target protein P61586

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
1FTN	Download	Experimental	e1ftnA1	P-loop domains-like	LigPlot
6V6U	Download	Experimental	e6v6uA1	P-loop domains-like	LigPlot
5C2K	Download	Experimental	e5c2kA1 e5c2kA2	GTPase activation domain, GAP P-loop domains-like	LigPlot
5M6X	Download	Experimental	e5m6xA1 e5m6xB1 e5m6xH1 e5m6xI1	GTPase activation domain, GAP P-loop domains-like GTPase activation domain, GAP P-loop domains-like	LigPlot
5M70	Download	Experimental	e5m70A1 e5m70B1 e5m70G1	GTPase activation domain, GAP P-loop domains-like P-loop domains-like	LigPlot
7QSC	Download	Experimental	e7qscA1 e7qscB1 e7qscC1 e7qscD1	GTPase activation domain, GAP P-loop domains-like GTPase activation domain, GAP P-loop domains-like	LigPlot
6V6V	Download	Experimental	e6v6vA1	P-loop domains-like	LigPlot
6KX3	Download	Experimental	e6kx3A1	P-loop domains-like	LigPlot
3LW8	Download	Experimental	e3lw8A1 e3lw8B1 e3lw8C1 e3lw8D1	P-loop domains-like P-loop domains-like P-loop domains-like P-loop domains-like	LigPlot
5FR1	Download	Experimental	e5fr1A1	P-loop domains-like	LigPlot
7WZA	Download	Experimental	e7wzaA1	P-loop domains-like	LigPlot
5IRC	Download	Experimental	e5ircA1 e5ircF1 e5ircB1 e5ircD1	GTPase activation domain, GAP P-loop domains-like GTPase activation domain, GAP P-loop domains-like	LigPlot
7WZC	Download	Experimental	e7wzcA1	P-loop domains-like	LigPlot
5HPY	Download	Experimental	e5hpyA1 e5hpyB1 e5hpyD1 e5hpyF1	GTPase activation domain, GAP P-loop domains-like GTPase activation domain, GAP P-loop domains-like	LigPlot
5C4M	Download	Experimental	e5c4mA1	P-loop domains-like	LigPlot
1DPF	Download	Experimental	e1dpfA1	P-loop domains-like	LigPlot
1OW3	Download	Experimental	e1ow3B1 e1ow3A1	P-loop domains-like GTPase activation domain, GAP	LigPlot
1CC0	Download	Experimental	e1cc0A1 e1cc0C1	P-loop domains-like P-loop domains-like	LigPlot
5BWM	Download	Experimental	e5bwmA1	P-loop domains-like	LigPlot
3MSX	Download	Experimental	e3msxB1 e3msxA1	GTPase activation domain, GAP P-loop domains-like	LigPlot
5EZ6	Download	Experimental	e5ez6B1	P-loop domains-like	LigPlot
8T1C	Download	Experimental	e8t1cE1	P-loop domains-like	LigPlot
5A0F	Download	Experimental	e5a0fA1	P-loop domains-like	LigPlot
3LXR	Download	Experimental	e3lxrA1	P-loop domains-like	LigPlot
4D0N	Download	Experimental	e4d0nA1	P-loop domains-like	LigPlot
8FC9	Download	Experimental	e8fc9E1 e8fc9F1 e8fc9G1 e8fc9H1	P-loop domains-like P-loop domains-like P-loop domains-like P-loop domains-like	LigPlot
7QTM	Download	Experimental	e7qtmA1 e7qtmB1 e7qtmH1 e7qtmI1	GTPase activation domain, GAP P-loop domains-like GTPase activation domain, GAP P-loop domains-like	LigPlot
3LWN	Download	Experimental	e3lwnA1 e3lwnB1	P-loop domains-like P-loop domains-like	LigPlot
8FC7	Download	Experimental	e8fc7E1 e8fc7F1 e8fc7G1 e8fc7H1	P-loop domains-like P-loop domains-like P-loop domains-like P-loop domains-like	LigPlot
6KX2	Download	Experimental	e6kx2A1	P-loop domains-like	LigPlot
5FR2	Download	Experimental	e5fr2A1	P-loop domains-like	LigPlot
1TX4	Download	Experimental	e1tx4B1 e1tx4A1	P-loop domains-like GTPase activation domain, GAP	LigPlot
6R3V	Download	Experimental	e6r3vA1 e6r3vB1	GTPase activation domain, GAP P-loop domains-like	LigPlot