PDB ligand accession: AP5
DrugBank: DB01717
PubChem:
ChEMBL:
InChI Key: OIMACDRJUANHTJ-XPWFQUROSA-N
SMILES: c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)OP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: (5'->5')-dinucleotides
- Subclass: None
- Class: (5'->5')-dinucleotides
- Superclass: Nucleosides, nucleotides, and analogues
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
1E4Y | Download | Experimental | e1e4yA2 e1e4yA1 e1e4yB2 e1e4yB1 | P-loop domains-like Rubredoxin-like P-loop domains-like Rubredoxin-like | LigPlot |
4X8L | Download | Experimental | e4x8lA1 e4x8lA2 e4x8lB1 e4x8lB2 | P-loop domains-like Rubredoxin-like P-loop domains-like Rubredoxin-like | LigPlot |
6HAM | Download | Experimental | e6hamA1 e6hamA2 | P-loop domains-like Rubredoxin-like | LigPlot |
3HPQ | Download | Experimental | e3hpqA1 e3hpqA2 e3hpqB1 e3hpqB2 | Rubredoxin-like P-loop domains-like Rubredoxin-like P-loop domains-like | LigPlot |
3HPR | Download | Experimental | e3hprA1 e3hprA2 e3hprB1 e3hprB2 | Rubredoxin-like P-loop domains-like Rubredoxin-like P-loop domains-like | LigPlot |
4X8O | Download | Experimental | e4x8oA1 e4x8oA2 e4x8oB1 e4x8oB2 | Rubredoxin-like P-loop domains-like P-loop domains-like Rubredoxin-like | LigPlot |
1E4V | Download | Experimental | e1e4vA2 e1e4vA1 e1e4vB2 e1e4vB1 | P-loop domains-like Rubredoxin-like P-loop domains-like Rubredoxin-like | LigPlot |
8BQF | Download | Experimental | e8bqfA1 e8bqfA2 e8bqfB2 e8bqfB1 e8bqfB2 e8bqfC2 e8bqfC1 e8bqfC2 e8bqfD1 e8bqfD2 e8bqfF2 e8bqfD2 e8bqfE1 e8bqfE2 e8bqfF1 e8bqfF2 | Rubredoxin-like P-loop domains-like P-loop domains-like Rubredoxin-like P-loop domains-like P-loop domains-like Rubredoxin-like P-loop domains-like Rubredoxin-like P-loop domains-like P-loop domains-like P-loop domains-like P-loop domains-like Rubredoxin-like Rubredoxin-like P-loop domains-like | LigPlot |
1AKE | Download | Experimental | e1akeA2 e1akeA1 e1akeB2 e1akeB1 | P-loop domains-like Rubredoxin-like P-loop domains-like Rubredoxin-like | LigPlot |