Ligand name: Agmatine
PDB ligand accession: AG2
DrugBank: DB08838
InChI Key: QYPPJABKJHAVHS-UHFFFAOYSA-N
SMILES: C(CCNC(=N)N)CN
Drug action: antagonist

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Organic nitrogen compounds
    • Class: Organonitrogen compounds
      • Subclass: Guanidines

List of PDB structures and/or AlphaFold models with target protein Q05586

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name
Q05586	Download	Predicted	Q05586_F1_nD2 Q05586_F1_nD1 Q05586_F1_nD4 Q05586_F1_nD3 Q05586_F1_nD5	Flavodoxin-like Flavodoxin-like Voltage-gated ion channels Periplasmic binding protein-like II Periplasmic binding protein-like II
5H8F		Predicted	e5h8fB2 e5h8fB1
5H8H		Predicted	e5h8hB1 e5h8hB2
5H8N		Predicted	e5h8nB1 e5h8nB2
5H8Q		Predicted	e5h8qB1 e5h8qB2
5I2K		Predicted	e5i2kB1 e5i2kB2
5I2N		Predicted	e5i2nB2 e5i2nB1
5KCJ		Predicted	e5kcjB2 e5kcjB1
5KDT		Predicted	e5kdtB1 e5kdtB2
5TP9		Predicted	e5tp9B1 e5tp9B2
5TPA		Predicted	e5tpaB1 e5tpaB2
6IRA		Predicted	e6iraA3 e6iraC5 e6iraA4 e6iraC1 e6iraA5 e6iraC2 e6iraA2 e6iraC3 e6iraA1 e6iraC4
6IRF		Predicted	e6irfA2 e6irfC5 e6irfA1 e6irfC4 e6irfA3 e6irfC2 e6irfA4 e6irfC1 e6irfA5 e6irfC3
6IRG		Predicted	e6irgC5 e6irgA2 e6irgC4 e6irgA4 e6irgC1 e6irgA3 e6irgC3 e6irgA5 e6irgC2 e6irgA1
6IRH		Predicted	e6irhC3 e6irhA5 e6irhC2 e6irhA4 e6irhC5 e6irhA3 e6irhC4 e6irhA1 e6irhC1 e6irhA2