Ligand name: GUANOSINE-5'-DIPHOSPHATE
PDB ligand accession: GDP
DrugBank: DB04315
PubChem: 8977;5280316;135398619;
ChEMBL: CHEMBL384759
InChI Key: QGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES: c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Purine nucleotides
      • Subclass: Purine ribonucleotides

List of PDB structures and/or AlphaFold models with target protein Q13509

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
7M18	Download	Experimental	e7m18B1 e7m18D1 e7m18F1 e7m18H1 e7m18J1 e7m18L1 e7m18N1 e7m18P1	Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like	LigPlot
7SJ7	Download	Experimental	e7sj7F1 e7sj7E1 e7sj7E2 e7sj7C1 e7sj7D2 e7sj7G2 e7sj7H2 e7sj7I2 e7sj7A1 e7sj7A2 e7sj7B1	Rossmann-like Rossmann-like Bacillus chorismate mutase-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like	LigPlot
7M20	Download	Experimental	e7m20B1 e7m20D1 e7m20F1 e7m20H1 e7m20J1 e7m20L1 e7m20N1 e7m20P1 e7m20R1	Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like	LigPlot
7SJ8	Download	Experimental	e7sj8E1 e7sj8E2 e7sj8F2 e7sj8C2 e7sj8D1 e7sj8G1 e7sj8H2 e7sj8I2 e7sj8A1 e7sj8A2 e7sj8B1	Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like	LigPlot
6S8L	Download	Experimental	e6s8lB2	Rossmann-like	LigPlot
7LXB	Download	Experimental	e7lxbB1 e7lxbD1 e7lxbF1 e7lxbH1 e7lxbJ1 e7lxbL1 e7lxbN1 e7lxbP1	Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like Rossmann-like	LigPlot
5IJ9	Download	Experimental	e5ij9B2	Rossmann-like	LigPlot
5IJ0	Download	Experimental	e5ij0B2	Rossmann-like	LigPlot
7Z6S	Download	Experimental	e7z6sA1 e7z6sA2 e7z6sB2 e7z6sH1	Bacillus chorismate mutase-like Rossmann-like Rossmann-like Rossmann-like	LigPlot