PDB ligand accession: GDP
DrugBank: DB04315
PubChem: 8977;5280316;135398619;
ChEMBL:
InChI Key: QGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES: c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Purine nucleotides
- Subclass: Purine ribonucleotides
- Class: Purine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 6WWG | Download | Experimental | e6wwgE1 e6wwgE2 e6wwgB1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 6CVJ | Download | Experimental | e6cvjA1 e6cvjA2 e6cvjC1 | Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
| 6O2T | Download | Experimental | e6o2t2A1 e6o2t1H1 e6o2t2B2 e6o2t1O1 e6o2t2C1 e6o2t1P2 e6o2t2D1 e6o2t1Q2 e6o2t2E2 e6o2t1R1 e6o2t2F2 e6o2t1S1 e6o2t2G2 e6o2t1T2 e6o2t2I2 e6o2t1U1 e6o2t2J2 e6o2t1V1 e6o2t2K1 e6o2t1W1 e6o2t2L1 e6o2t1X2 e6o2t2M1 e6o2t1Y1 e6o2t2N2 e6o2t1Z2 e6o2t3A1 e6o2t2H2 e6o2t3B2 e6o2t2O2 e6o2t3C1 e6o2t2P1 e6o2t3D1 e6o2t2Q1 e6o2t3E2 e6o2t2R1 e6o2t3F2 e6o2t2S1 e6o2t3G1 e6o2t2T1 e6o2t3I1 e6o2t2U2 e6o2t3J2 e6o2t2V2 e6o2t3K2 e6o2t2W1 e6o2t3L2 e6o2t2X1 e6o2t3M1 e6o2t2Y2 e6o2t3N1 e6o2t2Z1 e6o2t1A2 e6o2t4H2 e6o2t1B1 e6o2t4O1 e6o2t1C2 e6o2t4P1 e6o2t1D1 e6o2t4Q1 e6o2t1E1 e6o2t4R2 e6o2t1F2 e6o2t4S1 e6o2t1G1 e6o2t4T1 e6o2t1I1 e6o2t4U2 e6o2t1J2 e6o2t4V2 e6o2t1K2 e6o2t4W2 e6o2t1L1 e6o2t4X2 e6o2t1M2 e6o2t4Y2 e6o2t1N2 e6o2t4Z1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 6EW0 | Download | Experimental | e6ew0E1 e6ew0F2 e6ew0C1 e6ew0D2 e6ew0A1 e6ew0A2 e6ew0B1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
| 7CLD | Download | Experimental | e7cldC1 e7cldB1 | Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 7PQP | Download | Experimental | e7pqpC1 e7pqpB2 e7pqpE1 e7pqpD2 e7pqpG1 e7pqpF2 e7pqpI1 e7pqpH2 e7pqpK1 e7pqpJ2 e7pqpM1 e7pqpL1 e7pqpL2 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like | LigPlot |
| 6CVN | Download | Experimental | e6cvnC1 e6cvnB2 | Rossmann-like Bacillus chorismate mutase-like | LigPlot |
| 3JAR | Download | Experimental | e3jarE1 e3jarE2 e3jarF2 e3jarC1 e3jarD2 e3jarA1 e3jarA2 e3jarB1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
| 6EVZ | Download | Experimental | e6evzF1 e6evzE1 e6evzD2 e6evzC1 e6evzB1 e6evzA1 e6evzA2 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 6WWH | Download | Experimental | e6wwhE1 e6wwhE2 e6wwhB1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 7PQC | Download | Experimental | e7pqcC1 e7pqcB2 e7pqcE1 e7pqcD2 e7pqcG1 e7pqcF2 e7pqcI1 e7pqcH2 e7pqcK1 e7pqcJ2 e7pqcM1 e7pqcL1 e7pqcL2 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like | LigPlot |
| 7SGS | Download | Experimental | e7sgsB2 e7sgsC2 | Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 6WWK | Download | Experimental | e6wwkE1 e6wwkE2 e6wwkB2 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 6WWL | Download | Experimental | e6wwlE1 e6wwlE2 e6wwlB1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 3JAS | Download | Experimental | e3jasE1 e3jasE2 e3jasF1 e3jasC2 e3jasD2 e3jasA1 e3jasA2 e3jasB2 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
| 6DPV | Download | Experimental | e6dpvA1 e6dpvB2 e6dpvC1 e6dpvD1 e6dpvE1 e6dpvE2 e6dpvF1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 6O2Q | Download | Experimental | e6o2qA1 e6o2qA2 e6o2qB1 e6o2qC2 e6o2qD2 e6o2qE1 e6o2qE2 e6o2qF2 | Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
| 6O2S | Download | Experimental | e6o2s2A1 e6o2s1H1 e6o2s2B1 e6o2s1O1 e6o2s2C2 e6o2s1P2 e6o2s2D2 e6o2s1Q1 e6o2s2E2 e6o2s1R2 e6o2s2F2 e6o2s1S2 e6o2s2G1 e6o2s1T2 e6o2s2I2 e6o2s1U2 e6o2s2J2 e6o2s1V1 e6o2s2K1 e6o2s1W1 e6o2s2L2 e6o2s1X2 e6o2s2M2 e6o2s1Y1 e6o2s2N2 e6o2s1Z2 e6o2s3A2 e6o2s2H2 e6o2s3B1 e6o2s2O1 e6o2s3C1 e6o2s2P1 e6o2s3D1 e6o2s2Q2 e6o2s3E2 e6o2s2R1 e6o2s3F1 e6o2s2S2 e6o2s3G1 e6o2s2T2 e6o2s3I1 e6o2s2U1 e6o2s3J1 e6o2s2V2 e6o2s3K2 e6o2s2W2 e6o2s3L1 e6o2s2X1 e6o2s3M2 e6o2s2Y2 e6o2s3N1 e6o2s2Z1 e6o2s1A2 e6o2s4H2 e6o2s1B2 e6o2s4O1 e6o2s1C2 e6o2s4P2 e6o2s1D1 e6o2s4Q2 e6o2s1E2 e6o2s4R1 e6o2s1F1 e6o2s4S2 e6o2s1G1 e6o2s4T1 e6o2s1I1 e6o2s4U2 e6o2s1J2 e6o2s4V2 e6o2s1K1 e6o2s4W1 e6o2s1L1 e6o2s4X1 e6o2s1M2 e6o2s4Y1 e6o2s1N1 e6o2s4Z1 | Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like | LigPlot |
| 6O2R | Download | Experimental | e6o2rA1 e6o2rA2 e6o2rB2 e6o2rC1 e6o2rD2 e6o2rE1 e6o2rE2 e6o2rF1 | Bacillus chorismate mutase-like Rossmann-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
| 6EVX | Download | Experimental | e6evxF1 e6evxE1 e6evxD1 e6evxC2 e6evxA1 e6evxA2 e6evxB1 | Rossmann-like Bacillus chorismate mutase-like Rossmann-like Bacillus chorismate mutase-like Bacillus chorismate mutase-like Rossmann-like Rossmann-like | LigPlot |
| 7DP8 | Download | Experimental | e7dp8C1 e7dp8B2 | Bacillus chorismate mutase-like Rossmann-like | LigPlot |