Ligand name: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
PDB ligand accession: DUP
DrugBank: DB01965
PubChem: 448381
ChEMBL: CHEMBL1232397
InChI Key: XZLLMTSKYYYJLH-SHYZEUOFSA-N
SMILES: C1C(C(OC1N2C=CC(=O)NC2=O)COP(=O)(NP(=O)(O)OP(=O)(O)O)O)O
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Pyrimidine nucleosides
      • Subclass: Pyrimidine 2'-deoxyribonucleosides

List of PDB structures and/or AlphaFold models with target protein Q38087

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
7F4Y	Download	Experimental	e7f4yA2 e7f4yA4	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
3UIQ	Download	Experimental	e3uiqA6 e3uiqA7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
3SQ1	Download	Experimental	e3sq1A6 e3sq1A7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
3SI6	Download	Experimental	e3si6A6 e3si6A7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
3SCX	Download	Experimental	e3scxA6 e3scxA7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
3SQ0	Download	Experimental	e3sq0A6 e3sq0A7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
3SJJ	Download	Experimental	e3sjjA6 e3sjjA7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
3S9H	Download	Experimental	e3s9hA6 e3s9hA7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot
4KHQ	Download	Experimental	e4khqA6 e4khqA7	"fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits	LigPlot