Ligand name: URIDINE-5'-DIPHOSPHATE
PDB ligand accession: UDP
DrugBank: DB03435
PubChem: 6031;146015339;
ChEMBL: CHEMBL130266
InChI Key: XCCTYIAWTASOJW-XVFCMESISA-N
SMILES: C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)O)O)O
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Pyrimidine nucleotides
      • Subclass: Pyrimidine ribonucleotides

List of PDB structures and/or AlphaFold models with target protein Q4W1X2

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
4U8N	Download	Experimental	e4u8nA1 e4u8nA2 e4u8nB1 e4u8nB2	Rossmann-like FAD-linked reductases, C-terminal domain-like Rossmann-like FAD-linked reductases, C-terminal domain-like	LigPlot
3UKL	Download	Experimental	e3uklA1 e3uklA2 e3uklB1 e3uklB2 e3uklC1 e3uklC2 e3uklD1 e3uklD2 e3uklE1 e3uklE2 e3uklF1 e3uklF2 e3uklG1 e3uklG2 e3uklH1 e3uklH2	Rossmann-like FAD-linked reductases, C-terminal domain-like FAD-linked reductases, C-terminal domain-like Rossmann-like FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like	LigPlot
4U8O	Download	Experimental	e4u8oA1 e4u8oA2 e4u8oB1 e4u8oB2 e4u8oC1 e4u8oC2 e4u8oD1 e4u8oD2	FAD-linked reductases, C-terminal domain-like Rossmann-like FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like Rossmann-like FAD-linked reductases, C-terminal domain-like	LigPlot
4WX1	Download	Experimental	e4wx1A1 e4wx1A2 e4wx1B1 e4wx1B2	FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like	LigPlot
3UTG	Download	Experimental	e3utgA1 e3utgA2 e3utgB1 e3utgB2	Rossmann-like FAD-linked reductases, C-terminal domain-like Rossmann-like FAD-linked reductases, C-terminal domain-like	LigPlot
5HHF	Download	Experimental	e5hhfA1 e5hhfA2 e5hhfB1 e5hhfB2	FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like	LigPlot
3UKK	Download	Experimental	e3ukkA2 e3ukkA1 e3ukkB1 e3ukkB2 e3ukkC1 e3ukkC2 e3ukkD1 e3ukkD2	FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like FAD-linked reductases, C-terminal domain-like	LigPlot
4U8P	Download	Experimental	e4u8pA1 e4u8pA2 e4u8pB1 e4u8pB2 e4u8pC1 e4u8pC2 e4u8pD2	Rossmann-like FAD-linked reductases, C-terminal domain-like FAD-linked reductases, C-terminal domain-like Rossmann-like FAD-linked reductases, C-terminal domain-like Rossmann-like Rossmann-like	LigPlot