PDB ligand accession: DCT
DrugBank: n/a
PubChem:
ChEMBL:
InChI Key: ARLKCWCREKRROD-POYBYMJQSA-N
SMILES: C1CC(OC1COP(=O)(O)OP(=O)(O)OP(=O)(O)O)N2C=CC(=NC2=O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Pyrimidine nucleotides
- Subclass: Pyrimidine deoxyribonucleotides
- Class: Pyrimidine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
4DQP | Download | Experimental | e4dqpA10 e4dqpA11 e4dqpA12 e4dqpD9 e4dqpD11 e4dqpD12 | Ribonuclease H-like helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I | LigPlot |
2HVI | Download | Experimental | e2hviA4 e2hviA1 e2hviA2 e2hviD1 e2hviD2 e2hviD3 | Ribonuclease H-like helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
2HVH | Download | Experimental | e2hvhA1 e2hvhA2 e2hvhA3 e2hvhD1 e2hvhD2 e2hvhD3 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
3PX4 | Download | Experimental | e3px4A4 e3px4A2 e3px4A3 e3px4D1 e3px4D2 e3px4D3 | "fingers" domain in bacteriophage RB69-like DNA polymerase I Ribonuclease H-like helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |
3PX6 | Download | Experimental | e3px6A1 e3px6A2 e3px6A4 e3px6D1 e3px6D2 e3px6D3 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Ribonuclease H-like helical bundle in Bacillus stearothermophilus-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I Alpha-beta plaits | LigPlot |