PDB ligand accession: NAG
DrugBank: DB00141
PubChem:
ChEMBL:
InChI Key: OVRNDRQMDRJTHS-FMDGEEDCSA-N
SMILES: CC(=O)NC1C(C(C(OC1O)CO)O)O
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Organic oxygen compounds
- Class: Organooxygen compounds
- Subclass: Carbohydrates and carbohydrate conjugates
- Class: Organooxygen compounds
- Superclass: Organic oxygen compounds
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
5FUU | Download | Experimental | e5fuuA3 e5fuuC2 e5fuuE1 e5fuuA2 e5fuuA1 e5fuuA1 e5fuuA3 e5fuuC3 e5fuuC1 e5fuuC1 e5fuuC2 e5fuuE1 e5fuuE3 e5fuuE2 e5fuuE1 e5fuuE2 | Ribosomal protein L31e-like Ribosomal protein L31e-like Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain | LigPlot |
2B4C | Download | Experimental | e2b4cG2 e2b4cC1 e2b4cG2 | Ribosomal protein L31e-like Immunoglobulin-like beta-sandwich Ribosomal protein L31e-like | LigPlot |
5FYK | Download | Experimental | e5fykG1 e5fykG2 e5fykG1 e5fykG2 e5fykG2 e5fykG3 e5fykG3 | V1/V2 domain in HIV gp120 gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain gp120 inner domain Ribosomal protein L31e-like Ribosomal protein L31e-like | LigPlot |
7N6W | Download | Experimental | e7n6wA3 e7n6wB3 e7n6wC3 e7n6wA1 e7n6wA1 e7n6wA2 e7n6wB4 e7n6wB2 e7n6wB1 e7n6wB2 e7n6wB1 e7n6wC4 e7n6wC1 e7n6wC2 e7n6wC1 | MPER trimer MPER trimer MPER trimer Ribosomal protein L31e-like Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like V1/V2 domain in HIV gp120 Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like | LigPlot |
4JM2 | Download | Experimental | e4jm2E2 e4jm2B1 e4jm2A2 e4jm2E2 e4jm2A2 e4jm2E2 | Ribosomal protein L31e-like Immunoglobulin-like beta-sandwich Immunoglobulin-like beta-sandwich Ribosomal protein L31e-like Immunoglobulin-like beta-sandwich Ribosomal protein L31e-like | LigPlot |
7N6U | Download | Experimental | e7n6uA1 e7n6uB3 e7n6uC3 e7n6uA1 e7n6uA2 e7n6uB4 e7n6uB2 e7n6uB1 e7n6uB2 e7n6uB1 e7n6uC1 e7n6uC4 e7n6uC2 e7n6uC1 e7n6uC2 e7n6uC1 | Ribosomal protein L31e-like MPER trimer MPER trimer Ribosomal protein L31e-like gp120 inner domain V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like Ribosomal protein L31e-like V1/V2 domain in HIV gp120 gp120 inner domain Ribosomal protein L31e-like gp120 inner domain Ribosomal protein L31e-like | LigPlot |