PDB ligand accession: SQD
DrugBank: n/a
PubChem:
ChEMBL:
InChI Key: RVUUQPKXGDTQPG-JUDHQOGESA-N
SMILES: CCCCCCCCCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)CS(=O)(=O)O)O)O)O)OC(=O)CCCCCCCCCCCCCCC
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Lipids and lipid-like molecules
- Class: Glycerolipids
- Subclass: Glycosylglycerols
- Class: Glycerolipids
- Superclass: Lipids and lipid-like molecules
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 8F4F | Download | Experimental | e8f4fD1 e8f4fE1 e8f4fF1 e8f4fX1 e8f4fR1 e8f4fd1 e8f4fe1 e8f4ff1 e8f4fx1 e8f4fr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 7RF5 | Download | Experimental | e7rf5d1 e7rf5e1 e7rf5f1 e7rf5r1 e7rf5x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 8F4J | Download | Experimental | e8f4jD1 e8f4jE1 e8f4jF1 e8f4jX1 e8f4jR1 e8f4jd1 e8f4je1 e8f4jf1 e8f4jx1 e8f4jr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 6DHG | Download | Experimental | e6dhgD1 e6dhgE1 e6dhgF1 e6dhgX1 e6dhgR1 e6dhgd1 e6dhge1 e6dhgf1 e6dhgx1 e6dhgr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 6W1R | Download | Experimental | e6w1rD1 e6w1rE1 e6w1rF1 e6w1rR1 e6w1rX1 e6w1rd1 e6w1re1 e6w1rf1 e6w1rr1 e6w1rx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 7RF3 | Download | Experimental | e7rf3d1 e7rf3e1 e7rf3f1 e7rf3r1 e7rf3x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 6DHO | Download | Experimental | e6dhoD1 e6dhoE1 e6dhoF1 e6dhoX1 e6dhoR1 e6dhod1 e6dhoe1 e6dhof1 e6dhox1 e6dhor1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 6W1O | Download | Experimental | e6w1oD1 e6w1oE1 e6w1oF1 e6w1oR1 e6w1oX1 e6w1od1 e6w1oe1 e6w1of1 e6w1or1 e6w1ox1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 6W1T | Download | Experimental | e6w1tD1 e6w1tE1 e6w1tF1 e6w1tR1 e6w1tX1 e6w1td1 e6w1te1 e6w1tf1 e6w1tr1 e6w1tx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 6W1V | Download | Experimental | e6w1vD1 e6w1vE1 e6w1vF1 e6w1vR1 e6w1vX1 e6w1vb1 e6w1vd1 e6w1ve1 e6w1vf1 e6w1vr1 e6w1vx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 7RF1 | Download | Experimental | e7rf1d1 e7rf1e1 e7rf1f1 e7rf1x1 e7rf1r1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8F4C | Download | Experimental | e8f4cD1 e8f4cE1 e8f4cF1 e8f4cX1 e8f4cR1 e8f4cd1 e8f4ce1 e8f4cf1 e8f4cx1 e8f4cr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 7RF8 | Download | Experimental | e7rf8d1 e7rf8e1 e7rf8f1 e7rf8r1 e7rf8x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 7RF4 | Download | Experimental | e7rf4d1 e7rf4e1 e7rf4f1 e7rf4r1 e7rf4x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 6W1Q | Download | Experimental | e6w1qD1 e6w1qE1 e6w1qF1 e6w1qR1 e6w1qX1 e6w1qd1 e6w1qe1 e6w1qf1 e6w1qr1 e6w1qx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 6DHH | Download | Experimental | e6dhhD1 e6dhhE1 e6dhhF1 e6dhhX1 e6dhhR1 e6dhhd1 e6dhhe1 e6dhhf1 e6dhhx1 e6dhhr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8F4G | Download | Experimental | e8f4gD1 e8f4gE1 e8f4gF1 e8f4gX1 e8f4gR1 e8f4gd1 e8f4ge1 e8f4gf1 e8f4gx1 e8f4gr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 7RF2 | Download | Experimental | e7rf2d1 e7rf2e1 e7rf2f1 e7rf2r1 e7rf2x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 6W1P | Download | Experimental | e6w1pD1 e6w1pE1 e6w1pF1 e6w1pR1 e6w1pX1 e6w1px1 e6w1pd1 e6w1pe1 e6w1pf1 e6w1pr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY | LigPlot |
| 8F4K | Download | Experimental | e8f4kD1 e8f4kE1 e8f4kF1 e8f4kX1 e8f4kR1 e8f4kd1 e8f4ke1 e8f4kf1 e8f4kx1 e8f4kr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 4IL6 | Download | Experimental | e4il6E1 e4il6F1 e4il6R1 | Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY | LigPlot |
| 6W1U | Download | Experimental | e6w1uB2 e6w1uD1 e6w1uE1 e6w1uF1 e6w1uR1 e6w1uX1 e6w1ud1 e6w1ue1 e6w1uf1 e6w1ur1 e6w1ux1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 8GN2 | Download | Experimental | e8gn2E1 e8gn2D1 e8gn2F1 e8gn2X1 e8gn2R1 | Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8F4E | Download | Experimental | e8f4eD1 e8f4eE1 e8f4eF1 e8f4eX1 e8f4eR1 e8f4ed1 e8f4ee1 e8f4ef1 e8f4ex1 e8f4er1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 7YQ7 | Download | Experimental | e7yq7D1 e7yq7E1 e7yq7F1 e7yq7X1 e7yq7R1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8F4I | Download | Experimental | e8f4iD1 e8f4iE1 e8f4iF1 e8f4iX1 e8f4iR1 e8f4id1 e8f4ie1 e8f4if1 e8f4ix1 e8f4ir1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8F4D | Download | Experimental | e8f4dD1 e8f4dE1 e8f4dF1 e8f4dX1 e8f4dR1 e8f4dd1 e8f4de1 e8f4df1 e8f4dx1 e8f4dr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 7YQ2 | Download | Experimental | e7yq2D1 e7yq2E1 e7yq2F1 e7yq2X1 e7yq2R1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 7RF7 | Download | Experimental | e7rf7d1 e7rf7e1 e7rf7f1 e7rf7r1 e7rf7x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 7RF6 | Download | Experimental | e7rf6d1 e7rf6e1 e7rf6f1 e7rf6r1 e7rf6x1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 6DHF | Download | Experimental | e6dhfD1 e6dhfE1 e6dhfF1 e6dhfX1 e6dhfR1 e6dhfd1 e6dhfe1 e6dhff1 e6dhfx1 e6dhfr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 4PJ0 | Download | Experimental | e4pj0B1 e4pj0D1 e4pj0E1 e4pj0F1 e4pj0X1 e4pj0R1 e4pj0d1 e4pj0f1 e4pj0x1 e4pj0r1 | Photosystem II antenna protein-like Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8GN1 | Download | Experimental | e8gn1R1 e8gn1D1 e8gn1E1 e8gn1F1 e8gn1X1 | Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein | LigPlot |
| 5KAF | Download | Experimental | e5kafD1 e5kafE1 e5kafF1 e5kafX1 e5kafR1 e5kafd1 e5kafe1 e5kaff1 e5kafx1 e5kafr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 5KAI | Download | Experimental | e5kaiD1 e5kaiE1 e5kaiF1 e5kaiX1 e5kaiR1 e5kaid1 e5kaie1 e5kaif1 e5kaix1 e5kair1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8EZ5 | Download | Experimental | e8ez5D1 e8ez5E1 e8ez5F1 e8ez5X1 e8ez5R1 e8ez5d1 e8ez5e1 e8ez5f1 e8ez5x1 e8ez5r1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 8F4H | Download | Experimental | e8f4hD1 e8f4hE1 e8f4hF1 e8f4hX1 e8f4hR1 e8f4hd1 e8f4he1 e8f4hf1 e8f4hx1 e8f4hr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 6DHE | Download | Experimental | e6dheD1 e6dheF1 e6dheX1 e6dheR1 e6dheE1 e6dhee1 e6dhed1 e6dhef1 e6dhex1 e6dher1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Cytochrome b559 subunits Cytochrome b559 subunits Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 5MX2 | Download | Experimental | e5mx2D1 e5mx2E1 e5mx2F1 e5mx2X1 e5mx2R1 e5mx2d1 e5mx2e1 e5mx2f1 e5mx2x1 e5mx2r1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |
| 6DHP | Download | Experimental | e6dhpD1 e6dhpE1 e6dhpF1 e6dhpR1 e6dhpX1 e6dhpd1 e6dhpe1 e6dhpf1 e6dhpr1 e6dhpx1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II protein Y, psbY Photosystem II PsbX protein | LigPlot |
| 5TIS | Download | Experimental | e5tisd1 e5tise1 e5tisf1 e5tisx1 e5tisr1 | Bacterial photosystem II reaction centre L and M subunits-like Cytochrome b559 subunits Cytochrome b559 subunits Photosystem II PsbX protein Photosystem II protein Y, psbY | LigPlot |