Ligand name: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine
PDB ligand accession: 2TM
DrugBank: n/a
PubChem: 73659181
ChEMBL: n/a
InChI Key: STGUOVSTMBLHFT-ZOQUXTDFSA-N
SMILES: C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(CP(=O)(O)OP(=O)(O)O)O)O)O
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Organic oxygen compounds
    • Class: Organooxygen compounds
      • Subclass: Carbohydrates and carbohydrate conjugates

List of PDB structures and/or AlphaFold models with target protein Q8RQE8

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
4OIO	Download	Experimental	e4oioC1 e4oioC3 e4oioD2 e4oioD5 e4oioD7 e4oioC8	barrel domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel	LigPlot
7EH0	Download	Experimental	e7eh0C1 e7eh0C2 e7eh0C5 e7eh0D6 e7eh0D9 e7eh0D12	cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit	LigPlot
4Q4Z	Download	Experimental	e4q4zC1 e4q4zC3 e4q4zC8 e4q4zD4 e4q4zD5 e4q4zD11	barrel domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel central helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel	LigPlot
7EH1	Download	Experimental	e7eh1C2 e7eh1C5 e7eh1C6 e7eh1D2 e7eh1D7	cradle loop barrel N-terminal domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel	LigPlot
5X22	Download	Experimental	e5x22C1 e5x22C6 e5x22D2 e5x22D7 e5x22D11 e5x22C8 e5x22M1 e5x22M4 e5x22N4 e5x22N6 e5x22N11 e5x22M6	cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase central helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel N-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel central helical domain in RNA-polymerase beta-prime subunit N-terminal domain in beta subunit of DNA dependent RNA-polymerase	LigPlot