Ligand name: CYTIDINE-5'-TRIPHOSPHATE
PDB ligand accession: CTP
DrugBank: DB02431
PubChem: 6176
ChEMBL: CHEMBL223533
InChI Key: PCDQPRRSZKQHHS-XVFCMESISA-N
SMILES: C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
Drug action: n/a

ClassyFire chemical classification:

List of PDB structures and/or AlphaFold models with target protein Q8RQE8

PDB/AF Accession PyMOL script Experimental / Predicted Interacting ECOD domains ECOD X-group name LigPlot
5D4C Download Experimental e5d4cC1
e5d4cC6
e5d4cD4
e5d4cD9
e5d4cD10
e5d4cM1
e5d4cM7
e5d4cN7
e5d4cN8
e5d4cN9
barrel domain in beta subunit of DNA dependent RNA-polymerase
cradle loop barrel
second helical domain in RNA-polymerase beta-prime subunit
first helical domain in RNA-polymerase beta-prime subunit
cradle loop barrel
barrel domain in beta subunit of DNA dependent RNA-polymerase
cradle loop barrel
second helical domain in RNA-polymerase beta-prime subunit
first helical domain in RNA-polymerase beta-prime subunit
cradle loop barrel
LigPlot
5D4D Download Experimental e5d4dC1
e5d4dC7
e5d4dD9
e5d4dD10
e5d4dD11
e5d4dM5
e5d4dM6
e5d4dN2
e5d4dN4
e5d4dN12
cradle loop barrel
barrel domain in beta subunit of DNA dependent RNA-polymerase
second helical domain in RNA-polymerase beta-prime subunit
cradle loop barrel
first helical domain in RNA-polymerase beta-prime subunit
barrel domain in beta subunit of DNA dependent RNA-polymerase
cradle loop barrel
cradle loop barrel
first helical domain in RNA-polymerase beta-prime subunit
second helical domain in RNA-polymerase beta-prime subunit
LigPlot