PDB ligand accession: MG
DrugBank: n/a
PubChem:
ChEMBL: n/a
InChI Key: JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES: [Mg+2]
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Inorganic compounds
- Superclass: Homogeneous metal compounds
- Class: Homogeneous alkaline earth metal compounds
- Subclass: None
- Class: Homogeneous alkaline earth metal compounds
- Superclass: Homogeneous metal compounds
| PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
|---|---|---|---|---|---|
| 5X22 | Download | Experimental | e5x22D1 e5x22N2 | first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6M6A | Download | Experimental | e6m6aD3 | cradle loop barrel | LigPlot |
| 8HSG | Download | Experimental | e8hsgJ8 | cradle loop barrel | LigPlot |
| 4OIP | Download | Experimental | e4oipD10 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 5X21 | Download | Experimental | e5x21D3 | cradle loop barrel | LigPlot |
| 2O5I | Download | Experimental | e2o5iD4 e2o5iN1 | cradle loop barrel cradle loop barrel | LigPlot |
| 7MLB | Download | Experimental | e7mlbD7 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 2A69 | Download | Experimental | e2a69D10 e2a69N5 | alpha/beta-Hammerhead/Barrel-sandwich hybrid N-terminal domain in RNA-polymerase beta-prime subunit | LigPlot |
| 1SMY | Download | Experimental | e1smyM9 e1smyN4 e1smyN10 e1smyN1 e1smyN10 | cradle loop barrel cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 5VOI | Download | Experimental | e5voiB1 e5voiD7 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6P70 | Download | Experimental | e6p70B1 e6p70D3 e6p70D2 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 7MLI | Download | Experimental | e7mliD10 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 3DXJ | Download | Experimental | e3dxjD7 e3dxjB2 e3dxjD2 e3dxjN1 | first helical domain in RNA-polymerase beta-prime subunit Ribosomal protein TL5/L25 C-terminal domain-like cradle loop barrel cradle loop barrel | LigPlot |
| 5I2D | Download | Experimental | e5i2dD4 e5i2dO4 | cradle loop barrel cradle loop barrel | LigPlot |
| 6ASG | Download | Experimental | e6asgD9 | cradle loop barrel | LigPlot |
| 6KQH | Download | Experimental | e6kqhB2 e6kqhD6 e6kqhD7 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 5E17 | Download | Experimental | e5e17D2 | cradle loop barrel | LigPlot |
| 3AOI | Download | Experimental | e3aoiD1 e3aoiX1 e3aoiN1 e3aoiZ1 e3aoiI4 | cradle loop barrel Long alpha-hairpin cradle loop barrel Long alpha-hairpin cradle loop barrel | LigPlot |
| 2CW0 | Download | Experimental | e2cw0D3 e2cw0N10 | cradle loop barrel cradle loop barrel | LigPlot |
| 1ZYR | Download | Experimental | e1zyrD2 e1zyrN4 | cradle loop barrel cradle loop barrel | LigPlot |
| 7EH2 | Download | Experimental | e7eh2D10 e7eh2L1 e7eh2N1 e7eh2N11 | cradle loop barrel Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 2O5J | Download | Experimental | e2o5jD3 e2o5jD2 e2o5jC9 e2o5jD4 e2o5jN9 e2o5jN18 e2o5jM9 | cradle loop barrel first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 6OVR | Download | Experimental | e6ovrD7 e6ovrB1 e6ovrD4 | first helical domain in RNA-polymerase beta-prime subunit Ribosomal protein TL5/L25 C-terminal domain-like cradle loop barrel | LigPlot |
| 5TMC | Download | Experimental | e5tmcD6 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 5E18 | Download | Experimental | e5e18B2 e5e18D4 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6OY7 | Download | Experimental | e6oy7B2 e6oy7D4 e6oy7D1 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 6KQN | Download | Experimental | e6kqnB2 e6kqnD5 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6OVY | Download | Experimental | e6ovyD3 | cradle loop barrel | LigPlot |
| 3EQL | Download | Experimental | e3eqlD2 e3eqlN10 | cradle loop barrel cradle loop barrel | LigPlot |
| 7MLJ | Download | Experimental | e7mljB2 e7mljD10 e7mljD10 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 4Q4Z | Download | Experimental | e4q4zB1 e4q4zD1 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6KQM | Download | Experimental | e6kqmB1 e6kqmD3 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 2A68 | Download | Experimental | e2a68N2 | central helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 2A6E | Download | Experimental | e2a6eD9 e2a6eN10 | cradle loop barrel cradle loop barrel | LigPlot |
| 6KQF | Download | Experimental | e6kqfB1 e6kqfD8 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 4GZZ | Download | Experimental | e4gzzD9 | cradle loop barrel | LigPlot |
| 8HSL | Download | Experimental | e8hslJ5 | cradle loop barrel | LigPlot |
| 6OY6 | Download | Experimental | e6oy6D1 e6oy6B1 e6oy6C1 e6oy6D4 e6oy6D11 | first helical domain in RNA-polymerase beta-prime subunit Ribosomal protein TL5/L25 C-terminal domain-like cradle loop barrel cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6KQL | Download | Experimental | e6kqlD12 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 8HSH | Download | Experimental | e8hshJ3 | cradle loop barrel | LigPlot |
| 6KQD | Download | Experimental | e6kqdB2 e6kqdD12 e6kqdL2 e6kqdN5 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6OW3 | Download | Experimental | e6ow3D5 | cradle loop barrel | LigPlot |
| 4G7H | Download | Experimental | e4g7hD23 e4g7hN14 | first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 4G7Z | Download | Experimental | e4g7zD2 e4g7zN2 | cradle loop barrel cradle loop barrel | LigPlot |
| 6KQE | Download | Experimental | e6kqeB1 e6kqeD12 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 2PPB | Download | Experimental | e2ppbC6 e2ppbC9 e2ppbD5 e2ppbD6 e2ppbD9 e2ppbN2 e2ppbN35 e2ppbN41 e2ppbM6 e2ppbM9 | barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel cradle loop barrel first helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel | LigPlot |
| 8HSR | Download | Experimental | e8hsrJ9 | cradle loop barrel | LigPlot |
| 6M6C | Download | Experimental | e6m6cD7 | cradle loop barrel | LigPlot |
| 6OY5 | Download | Experimental | e6oy5D10 e6oy5B1 e6oy5C4 e6oy5D3 e6oy5D6 | first helical domain in RNA-polymerase beta-prime subunit Ribosomal protein TL5/L25 C-terminal domain-like cradle loop barrel cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 4GZY | Download | Experimental | e4gzyD2 | cradle loop barrel | LigPlot |
| 5D4E | Download | Experimental | e5d4eC7 e5d4eD3 e5d4eD10 e5d4eL1 e5d4eN2 e5d4eM2 e5d4eN1 e5d4eN12 | cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 4G7O | Download | Experimental | e4g7oD14 e4g7oB1 e4g7oN12 e4g7oL2 | first helical domain in RNA-polymerase beta-prime subunit Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit Ribosomal protein TL5/L25 C-terminal domain-like | LigPlot |
| 7EH1 | Download | Experimental | e7eh1B1 e7eh1D8 e7eh1D7 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 6P71 | Download | Experimental | e6p71C4 e6p71D3 e6p71D4 | cradle loop barrel cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 3AOH | Download | Experimental | e3aohD8 e3aohI18 e3aohN5 | cradle loop barrel cradle loop barrel cradle loop barrel | LigPlot |
| 5D4D | Download | Experimental | e5d4dC1 e5d4dD9 e5d4dD10 e5d4dM6 e5d4dN2 | cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel cradle loop barrel cradle loop barrel | LigPlot |
| 6WOY | Download | Experimental | e6woyC3 e6woyC6 e6woyD4 e6woyD9 | cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 4Q5S | Download | Experimental | e4q5sD10 | cradle loop barrel | LigPlot |
| 6L74 | Download | Experimental | e6l74B2 e6l74D5 e6l74D5 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 4OIO | Download | Experimental | e4oioD2 e4oioD5 e4oioC8 | cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 4OIR | Download | Experimental | e4oirB1 e4oirD8 e4oirD8 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6M6B | Download | Experimental | e6m6bD7 | cradle loop barrel | LigPlot |
| 6WOX | Download | Experimental | e6woxD8 | cradle loop barrel | LigPlot |
| 4OIN | Download | Experimental | e4oinD8 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 2BE5 | Download | Experimental | e2be5C6 e2be5C9 e2be5D1 e2be5D6 e2be5D6 e2be5M6 e2be5M9 e2be5N7 e2be5N8 | barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 6LTS | Download | Experimental | e6ltsD11 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 5D4C | Download | Experimental | e5d4cC6 e5d4cD4 e5d4cD10 e5d4cL2 e5d4cN8 e5d4cM7 e5d4cN7 e5d4cN9 | cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 7RDQ | Download | Experimental | e7rdqD3 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 5VO8 | Download | Experimental | e5vo8B1 e5vo8D9 e5vo8D6 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
| 7EH0 | Download | Experimental | e7eh0D6 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 6KQG | Download | Experimental | e6kqgB1 e6kqgD1 | Ribosomal protein TL5/L25 C-terminal domain-like first helical domain in RNA-polymerase beta-prime subunit | LigPlot |
| 2A6H | Download | Experimental | e2a6hD8 e2a6hN5 | cradle loop barrel cradle loop barrel | LigPlot |
| 4WQT | Download | Experimental | e4wqtD1 e4wqtI10 e4wqtN10 | cradle loop barrel cradle loop barrel cradle loop barrel | LigPlot |
| 4MQ9 | Download | Experimental | e4mq9D3 | cradle loop barrel | LigPlot |
| 4OIQ | Download | Experimental | e4oiqD7 | first helical domain in RNA-polymerase beta-prime subunit | LigPlot |