PDB ligand accession: ATP
DrugBank: DB00171
PubChem:
ChEMBL:
InChI Key: ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES: c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
Drug action: n/a
ClassyFire chemical classification:
- Kingdom: Organic compounds
- Superclass: Nucleosides, nucleotides, and analogues
- Class: Purine nucleotides
- Subclass: Purine ribonucleotides
- Class: Purine nucleotides
- Superclass: Nucleosides, nucleotides, and analogues
PDB/AF Accession | PyMOL script | Experimental / Predicted | Interacting ECOD domains | ECOD X-group name | LigPlot |
---|---|---|---|---|---|
4Q5S | Download | Experimental | e4q5sC3 e4q5sF2 | N-terminal domain in beta subunit of DNA dependent RNA-polymerase HTH | LigPlot |
4Q4Z | Download | Experimental | e4q4zC1 e4q4zC6 e4q4zC8 e4q4zD11 | barrel domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel cradle loop barrel | LigPlot |
5D4C | Download | Experimental | e5d4cC1 e5d4cC3 e5d4cC6 e5d4cC7 e5d4cD10 e5d4cM1 e5d4cM3 e5d4cM4 e5d4cM7 e5d4cN2 e5d4cN9 | barrel domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel N-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel barrel domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel N-terminal domain in RNA-polymerase beta-prime subunit cradle loop barrel | LigPlot |
4OIO | Download | Experimental | e4oioC1 e4oioC3 e4oioC6 e4oioD2 e4oioC8 | barrel domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel cradle loop barrel | LigPlot |
4OIP | Download | Experimental | e4oipC1 e4oipC8 e4oipD4 e4oipD7 e4oipD8 e4oipD10 | barrel domain in beta subunit of DNA dependent RNA-polymerase cradle loop barrel second helical domain in RNA-polymerase beta-prime subunit cradle loop barrel central helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit | LigPlot |