Ligand name: STREPTOLYDIGIN
PDB ligand accession: STD
DrugBank: DB04785
PubChem: 54708748
ChEMBL: CHEMBL1236068
InChI Key: KVTPRMVXYZKLIG-NCAOFHFGSA-N
SMILES: CC1C2C=CC3(CO3)C(O2)(OC1C(C)C=C(C)C=CC(=C4C(=O)C(N(C4=O)C5CCC(C(O5)C)O)C(C)C(=O)NC)O)C
Drug action: n/a

ClassyFire chemical classification:

List of PDB structures and/or AlphaFold models with target protein Q8RQE9

PDB/AF Accession PyMOL script Experimental / Predicted Interacting ECOD domains ECOD X-group name LigPlot
2A6H Download Experimental e2a6hD2
e2a6hD4
e2a6hC4
e2a6hN1
e2a6hN8
e2a6hM4
second helical domain in RNA-polymerase beta-prime subunit
central helical domain in RNA-polymerase beta-prime subunit
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
second helical domain in RNA-polymerase beta-prime subunit
central helical domain in RNA-polymerase beta-prime subunit
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
LigPlot
1ZYR Download Experimental e1zyrD1
e1zyrD8
e1zyrC4
e1zyrN1
e1zyrN8
e1zyrM4
second helical domain in RNA-polymerase beta-prime subunit
central helical domain in RNA-polymerase beta-prime subunit
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
central helical domain in RNA-polymerase beta-prime subunit
second helical domain in RNA-polymerase beta-prime subunit
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
LigPlot
2PPB Download Experimental e2ppbD4
e2ppbD5
e2ppbC4
e2ppbN41
e2ppbM4
central helical domain in RNA-polymerase beta-prime subunit
second helical domain in RNA-polymerase beta-prime subunit
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
second helical domain in RNA-polymerase beta-prime subunit
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
LigPlot