Ligand name: GUANOSINE-5'-DIPHOSPHATE
PDB ligand accession: GDP
DrugBank: DB04315
PubChem: 8977;5280316;135398619;
ChEMBL: CHEMBL384759
InChI Key: QGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES: c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Drug action: n/a

ClassyFire chemical classification:

• Kingdom: Organic compounds
  • Superclass: Nucleosides, nucleotides, and analogues
    • Class: Purine nucleotides
      • Subclass: Purine ribonucleotides

List of PDB structures and/or AlphaFold models with target protein Q9LT31

PDB/AF Accession	PyMOL script	Experimental / Predicted	Interacting ECOD domains	ECOD X-group name	LigPlot
4G01	Download	Experimental	e4g01A1 e4g01B1	VPS9 domain P-loop domains-like	LigPlot
2EFC	Download	Experimental	e2efcA1 e2efcA2 e2efcB1 e2efcC1 e2efcD1	VPS9 domain Bromodomain-like P-loop domains-like VPS9 domain P-loop domains-like	LigPlot
2EFH	Download	Experimental	e2efhA1 e2efhA2 e2efhB1 e2efhC1 e2efhD1	VPS9 domain Bromodomain-like P-loop domains-like VPS9 domain P-loop domains-like	LigPlot