PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 0T3 | 4-[(5R)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-5-yl]benzonitrile | Organic compounds | Organoheterocyclic compounds | Imidazopyridines | n/a |
| Explore | n/a | 0T4 | 3-(hydroxyamino)-N-[(1R)-1-phenylethyl]-5-(trifluoromethyl)benzamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0T5 | 3-nitro-N-[(1R)-1-phenylethyl]-5-(trifluoromethyl)benzamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0T6 | 1-(2-chlorophenyl)-6,8-dimethoxy-3-methylimidazo[5,1-c][1,2,4]benzotriazine | Organic compounds | Organoheterocyclic compounds | Azoles | Imidazoles |
| Explore | n/a | 0T7 | 3,4-dimethyl-1-propyl-7-(quinolin-2-ylmethoxy)imidazo[1,5-a]quinoxaline | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0T8 | 4-(cyclopentylamino)-N-[3-(2-oxopyrrolidin-1-yl)propyl]-2-{[2-(pyridin-4-yl)ethyl]amino}pyrimidine-5-carboxamide | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0T9 | (3S,8S,9S,10R,13S,14S,17R)-3-hydroxy-10,13-dimethyl-17-[(2S,6S)-6-methyl-3-oxooctan-2-yl]-1,2,3,4,7,8,9,10,11,12,13,14,15,17-tetradecahydro-16H-cyclopenta[a]phenanthren-16-one | Organic compounds | Lipids and lipid-like molecules | Steroids and steroid derivatives | Bile acids, alcohols and derivatives |
| Explore | n/a | 0TA | 2-amino-8-cyclopentyl-4-methyl-6-(1H-pyrazol-4-yl)pyrido[2,3-d]pyrimidin-7(8H)-one | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Pyrazolylpyridines |
| Explore | n/a | 0TB | 2-amino-6-(5-fluoro-6-methoxypyridin-3-yl)-4-methyl-8-(pyrrolidin-1-yl)pyrido[2,3-d]pyrimidin-7(8H)-one | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Bipyridines and oligopyridines |
| Explore | n/a | 0TE | chloro{methyl hydrogenato(3-)-kappa~2~N,S [pyridin-2-yl(pyridin-2(1H)-ylidene-kappaN)methyl]carbonodithiohydrazonate}copper | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Hydropyridines |
| Explore | n/a | 0TF | N~6~-D-ornithyl-L-lysine | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0TK | (2R)-2,5-diaminopentanoyl dihydrogen phosphate | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0TL | [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate | n/a | n/a | n/a | n/a |
| Explore | n/a | 0TM | 2-{[4-(2-chloro-4,5-dimethoxyphenyl)-5-cyano-7H-pyrrolo[2,3-d]pyrimidin-2-yl]sulfanyl}-N,N-dimethylacetamide | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0TO | N-(3-chlorophenyl)-6,7-dimethoxyquinazolin-4-amine | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0TP | 4-amino-N-methyl-2-[4-(morpholin-4-yl)phenyl]thieno[3,2-c]pyridine-7-carboxamide | Organic compounds | Organoheterocyclic compounds | Oxazinanes | Morpholines |
| Explore | n/a | 0TQ | (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-3-hydroxy-4-[({(3Z)-3-[1-(methylamino)ethylidene]-2-oxo-2,3-dihydro-1H-indol-5-yl}sulfonyl)(2-methylpropyl)amino]-1-phenylbutan-2-yl}carbamate | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylbutylamines |
| Explore | n/a | 0TR | 2-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE | Organic compounds | Hydrocarbon derivatives | Tropones | Tropolones |
| Explore | n/a | 0TT | 1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5R)-1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione | Organic compounds | Nucleosides, nucleotides, and analogues | Pyrimidine nucleosides | Pyrimidine 2'-deoxyribonucleosides |
| Explore | n/a | 0TU | 6-chloroquinolin-2(1H)-one | Organic compounds | Organoheterocyclic compounds | Quinolines and derivatives | Quinolones and derivatives |
| Explore | n/a | 0TX | (4S)-N~4~-(7-chloroquinolin-4-yl)-N~1~,N~1~-diethylpentane-1,4-diamine | Organic compounds | Organoheterocyclic compounds | Quinolines and derivatives | Aminoquinolines and derivatives |
| Explore | n/a | 0TZ | 3-(4-amino-6-methyl-1,3,5-triazin-2-yl)-N-(1H-pyrazol-5-yl)imidazo[1,2-a]pyridin-2-amine | Organic compounds | Organoheterocyclic compounds | Imidazopyridines | n/a |
| Explore | n/a | 0U | L-URIDINE-5'-MONOPHOSPHATE | Organic compounds | Nucleosides, nucleotides, and analogues | Pyrimidine nucleotides | Pyrimidine ribonucleotides |
| Explore | n/a | 0U0 | 3-[2-methyl-6-(pyrazin-2-ylamino)pyrimidin-4-yl]-N-(1H-pyrazol-3-yl)imidazo[1,2-b]pyridazin-2-amine | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0U3 | N-hydroxy-2-{4-[3-(4-{[(2S)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}acetamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Diphenylmethanes |
| Explore | n/a | 0U4 | N-[(2S,3R)-4-{[2-(1-benzylpiperidin-4-yl)ethyl]amino}-3-hydroxy-1-phenylbutan-2-yl]-5-[methyl(methylsulfonyl)amino]-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0U5 | (2E)-3-{5-[(2,4-diamino-6-propylpyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(2-methylprop-1-en-1-yl)phthalazin-2(1H)-yl]prop-2-en-1-one | Organic compounds | Phenylpropanoids and polyketides | Cinnamic acids and derivatives | n/a |
| Explore | n/a | 0U6 | (2E)-3-{5-[(2,4-diamino-6-ethylpyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(2-methylprop-1-en-1-yl)phthalazin-2(1H)-yl]prop-2-en-1-one | Organic compounds | Phenylpropanoids and polyketides | Cinnamic acids and derivatives | n/a |
| Explore | n/a | 0U7 | 3-[5-(3,5-dichlorophenyl)-1,3,4-oxadiazol-2-yl]benzenesulfonyl fluoride | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzenesulfonyl compounds |
| Explore | n/a | 0U8 | (1R,4R,5S,6S,7R,10R,11S,12S)-1,7-bis(hydroxymethyl)-2,8,13,14-tetraoxatricyclo[8.2.1.1~4,7~]tetradecane-5,6,11,12-tetrol | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbohydrates and carbohydrate conjugates |