PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 031 | (3aS,5R,6aR)-hexahydro-2H-cyclopenta[b]furan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-([(4-methoxyphenyl)sulfonyl]{[(2R)-5-oxopyrrolidin-2-yl]methyl}amino)propyl]carbamate | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylbutylamines |
| Explore | DB08881 | 032 | N-(3-{[5-(4-chlorophenyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]carbonyl}-2,4-difluorophenyl)propane-1-sulfonamide | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbonyl compounds |
| Explore | n/a | 033 | N-({4'-[(1-BENZOFURAN-2-YLCARBONYL)AMINO]-1,1'-BIPHENYL-4-YL}SULFONYL)-L-VALINE | Organic compounds | Benzenoids | Benzene and substituted derivatives | Anilides |
| Explore | n/a | 034 | 5-(4-{[3-(2,6-dichlorophenyl)-5-(propan-2-yl)-1,2-oxazol-4-yl]methoxy}phenyl)-1H-indole-2-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Indoles and derivatives | Indolecarboxylic acids and derivatives |
| Explore | n/a | 035 | (2S)-2,7-bis(phosphonooxy)heptanoic acid | Organic compounds | Lipids and lipid-like molecules | Fatty Acyls | Fatty acids and conjugates |
| Explore | n/a | 036 | (2R)-2,7-bis(phosphonooxy)heptanoic acid | Organic compounds | Lipids and lipid-like molecules | Fatty Acyls | Fatty acids and conjugates |
| Explore | n/a | 038 | 3-[[(2S)-2-[[[(2S)-2-[[(2S)-2-[[(2S)-2-azanyl-3-(1H-1,2,3,4-tetrazol-5-ylcarbonylamino)propanoyl]amino]-3-methyl-butanoyl]amino]-4-methyl-pentanoyl]amino]methyl]-2-hydroxy-4-phenyl-butanoyl]amino]benzoic acid | Organic compounds | Organic acids and derivatives | Peptidomimetics | Hybrid peptides |
| Explore | DB06831 | 039 | 2-((9H-PURIN-6-YLTHIO)METHYL)-5-CHLORO-3-(2-METHOXYPHENYL)QUINAZOLIN-4(3H)-ONE | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 03B | 5-(4-chlorophenyl)-4-{3-[4-(4-{[(4-{[(2R)-4-(dimethylamino)-1-(phenylsulfanyl)butan-2-yl]amino}-3-nitrophenyl)sulfonyl]amino}phenyl)piperazin-1-yl]phenyl}-1,2-dimethyl-1H-pyrrole-3-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Pyrroles | Substituted pyrroles |
| Explore | n/a | 03C | [5-amino-1-(2-methylphenyl)-1H-pyrazol-4-yl]{3-[1-(methylsulfonyl)piperidin-4-yl]phenyl}methanone | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoyl derivatives |
| Explore | n/a | 03D | (2R,4S,5S)-N-[(2S,3R,4S)-1-cyclohexyl-3,4-dihydroxy-6-methylheptan-2-yl]-2-(cyclopropylmethyl)-4,5-dihydroxy-6-phenylhexanamide | Organic compounds | Lipids and lipid-like molecules | Fatty Acyls | Fatty amides |
| Explore | n/a | 03F | (9Z)-N-[(2S,3R,4E)-1-(beta-D-glucopyranosyloxy)-3-hydroxyoctadec-4-en-2-yl]octadec-9-enamide | Organic compounds | Lipids and lipid-like molecules | Sphingolipids | Glycosphingolipids |
| Explore | n/a | 03G | N-(4-chlorophenyl)-N'-(2,2,6,6-tetramethylpiperidin-4-yl)ethanediamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 03H | (2S)-2-chloro-4-methylpentanoic acid | Organic compounds | Lipids and lipid-like molecules | Fatty Acyls | Fatty acids and conjugates |
| Explore | n/a | 03I | (2R)-N-hydroxy-2-methyl-2-(methylsulfonyl)-4-{4'-[3-(morpholin-4-yl)propoxy]biphenyl-4-yl}butanamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Biphenyls and derivatives |
| Explore | n/a | 03K | N-(5-cyclopropyl-1H-pyrazol-3-yl)benzene-1,4-dicarboxamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 03L | 2-({2-chloro-6-[(2,4-dichlorophenyl)sulfanyl]benzyl}carbamoyl)benzoic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 03M | (5Z)-5-[(6-chloro-7-methyl-1H-indol-3-yl)methylidene]-3-(3,4-difluorobenzyl)imidazolidine-2,4-dione | Organic compounds | Organoheterocyclic compounds | Azolidines | Imidazolidines |
| Explore | n/a | 03P | N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3-hydroxy-3-methylbutanamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Diphenylethers |
| Explore | n/a | 03Q | 2-{2-[4-({5-chloro-6-[3-(trifluoromethyl)phenoxy]pyridin-3-yl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethoxy}ethanol | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Ethers |
| Explore | n/a | 03R | 2-({6-{3-[AMINO(IMINO)METHYL]PHENOXY}-3,5-DIFLUORO-4-[(1-METHYL-3-PHENYLPROPYL)AMINO]-2-PYRIDINYL}OXY)BENZOIC ACID | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Ethers |
| Explore | n/a | 03S | methanesulfonic acid | Organic compounds | Organic acids and derivatives | Organic sulfonic acids and derivatives | Organosulfonic acids and derivatives |
| Explore | n/a | 03T | 1-benzothiophene-2-sulfonamide | Organic compounds | Organoheterocyclic compounds | Benzothiophenes | 1-benzothiophenes |
| Explore | n/a | 03U | methyl 4-{[(2Z)-2-cyano-3-hydroxypent-2-enoyl]amino}-4'-fluorobiphenyl-2-carboxylate | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 03V | naphthalen-2-ol | Organic compounds | Benzenoids | Naphthalenes | Naphthols and derivatives |
| Explore | n/a | 03W | (2R)-propane-1,1,2,3-tetrol | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Alcohols and polyols |
| Explore | n/a | 03X | N-{4-[(6,7-dimethoxyquinolin-4-yl)oxy]-3-fluorophenyl}-1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazole-4-carboxamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Anilides |
| Explore | n/a | 03Z | 4-[(4-amino-5-benzoyl-1,3-thiazol-2-yl)amino]benzenesulfonamide | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbonyl compounds |
| Explore | n/a | 040 | 4-(2-methylphenyl)-2,4-dioxobutanoic acid | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbonyl compounds |
| Explore | DB06832 | 041 | 2-(3-FLUORO-4-HYDROXYPHENYL)-7-VINYL-1,3-BENZOXAZOL-5-OL | Organic compounds | Organoheterocyclic compounds | Azoles | Oxazoles |