PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | DB06843 | 103 | 2',5'-DIDEOXY-ADENOSINE 3'-MONOPHOSPHATE | Organic compounds | Nucleosides, nucleotides, and analogues | Ribonucleoside 3'-phosphates | n/a |
| Explore | DB00713 | 105 | N-[5-METHYL-3-O-TOLYL-ISOXAZOLE-4-CARBOXYLIC ACID AMIDE] BORONIC ACID | Organic compounds | Benzenoids | Benzene and substituted derivatives | Halobenzenes |
| Explore | DB02973 | 106 | 4-[(2Z)-2-(5-bromo-2-oxo-1,2-dihydro-3H-indol-3-ylidene)hydrazinyl]benzene-1-sulfonamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzenesulfonamides |
| Explore | DB06844 | 107 | 4-[(7-OXO-7H-THIAZOLO[5,4-E]INDOL-8-YLMETHYL)-AMINO]-N-PYRIDIN-2-YL-BENZENESULFONAMIDE | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzenesulfonamides |
| Explore | n/a | 108 | 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 109 | 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | DB04221 | 10A | DIDECYL-DIMETHYL-AMMONIUM | Organic compounds | Organic nitrogen compounds | Organonitrogen compounds | Quaternary ammonium salts |
| Explore | n/a | 10B | N-2-(biphenyl-4-ylsulfonyl)-N-2-(isopropyloxy)-acetohydroxamic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Biphenyls and derivatives |
| Explore | n/a | 10D | (2E)-4-fluoro-3-methylbut-2-en-1-yl trihydrogen diphosphate | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Isoprenoid phosphates |
| Explore | n/a | 10E | (2E)-4-amino-3-methylbut-2-en-1-yl trihydrogen diphosphate | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Isoprenoid phosphates |
| Explore | n/a | 10F | N-({4-[{[(2R,4S,4aR,6S,8aS)-2-amino-4-hydroxydecahydropteridin-6-yl]methyl}(formyl)amino]phenyl}carbonyl)-D-glutamic acid | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 10G | (2E)-3-methyl-4-sulfanylbut-2-en-1-yl trihydrogen diphosphate | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Isoprenoid phosphates |
| Explore | n/a | 10H | 1-(4-{[(2R)-2-methylpiperidin-1-yl]sulfonyl}phenyl)-1,3-dihydro-2H-pyrrol-2-one | Organic compounds | Organoheterocyclic compounds | Pyrrolines | Phenylpyrrolines |
| Explore | n/a | 10I | N-(2,6-diethylphenyl)-N'-(N-propylcarbamimidoyl)urea | Organic compounds | Benzenoids | Benzene and substituted derivatives | N-phenylureas |
| Explore | n/a | 10J | 3-{5-[(2E,4aR,7aR)-6-benzoyl-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 10K | N-(3-cyclopropyl-1H-pyrazol-5-yl)-2-[4-(thiophen-2-yl)phenyl]acetamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylacetamides |
| Explore | n/a | 10L | 1H-indazol-7-amine | Organic compounds | Organoheterocyclic compounds | Benzopyrazoles | Indazoles |
| Explore | n/a | 10M | decyl 4-O-alpha-D-glucopyranosyl-1-thio-beta-D-glucopyranoside | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbohydrates and carbohydrate conjugates |
| Explore | n/a | 10N | N-(3-{[(5-cyano-2-phenyl-1H-pyrrolo[2,3-b]pyridin-4-yl)amino]methyl}pyridin-2-yl)-N-methylmethanesulfonamide | Organic compounds | Organoheterocyclic compounds | Pyrroles | Substituted pyrroles |
| Explore | n/a | 10O | 3-{5-[(2E,4aR,7aR)-2-imino-6-(6-methoxypyridin-2-yl)-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzonitriles |
| Explore | n/a | 10P | D-phenylalanyl-N-[(1-methylpyridinium-3-yl)methyl]-L-prolinamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 10Q | 2-{(2E,4aR,7aR)-7a-[4-(3-cyanophenyl)thiophen-2-yl]-2-imino-3-methyl-4-oxooctahydro-6H-pyrrolo[3,4-d]pyrimidin-6-yl}pyridine-3-carbonitrile | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzonitriles |
| Explore | n/a | 10R | 1-(2-[(R)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Alcohols and polyols |
| Explore | n/a | 10S | 1-(2-[(S)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Alcohols and polyols |
| Explore | n/a | 10T | 5-(aminomethyl)-2-methyl-4-(4-methylphenyl)-6-(2-methylpropyl)pyridine-3-carboxic acid | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Phenylpyridines |
| Explore | DB06845 | 10U | (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclopentylamino)ethanoyl)pyrrolidine-2-carboxamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 10V | 3-{5-[(2E,4aR,7aR)-2-imino-6-(3-methoxypyridin-2-yl)-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzonitriles |
| Explore | n/a | 10W | 2-fluoro-5-{5-[(2E,4aR,7aR)-2-imino-3-methyl-4-oxo-6-phenyloctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-2-yl}benzonitrile | Organic compounds | Organoheterocyclic compounds | Pyrrolidines | Phenylpyrrolidines |
| Explore | n/a | 10X | (9Z)-11-{(2S,3S)-3-[(2Z)-pent-2-en-1-yl]oxiran-2-yl}undec-9-enoic acid | Organic compounds | Lipids and lipid-like molecules | Fatty Acyls | Fatty acids and conjugates |
| Explore | n/a | 10Y | (9Z)-11-{(2R,3S)-3-[(2Z)-pent-2-en-1-yl]oxiran-2-yl}undec-9-enoic acid | Organic compounds | Lipids and lipid-like molecules | Fatty Acyls | Fatty acids and conjugates |