PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 06Y | 2-phenoxyethanoic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenoxyacetic acid derivatives |
| Explore | n/a | 06Z | {4-amino-2-[(3-fluorophenyl)amino]-1,3-thiazol-5-yl}(phenyl)methanone | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbonyl compounds |
| Explore | n/a | 071 | 8-{[2-methoxy-5-(4-methylpiperazin-1-yl)phenyl]amino}-1-methyl-4,5-dihydro-1H-pyrazolo[4,3-h]quinazoline-3-carboxamide | Organic compounds | Organoheterocyclic compounds | Diazinanes | Piperazines |
| Explore | n/a | 072 | (+/-)(2S,5S)-3-(4-(4-CARBOXYPHENYL)BUTYL)-2-HEPTYL-4-OXO-5-THIAZOLIDINE | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylbutylamines |
| Explore | n/a | 073 | (4-{(2S,4E)-2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-2-[4-(METHOXYCARBONYL)PHENYL]-5-PHENYLPENT-4-ENYL}PHENYL)(DIFLUORO)METHYLPHOSPHONIC ACID | Organic compounds | Phenylpropanoids and polyketides | Stilbenes | n/a |
| Explore | DB02855 | 074 | [PROPYLAMINO-3-HYDROXY-BUTAN-1,4-DIONYL]-ISOLEUCYL-PROLINE | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 075 | (4R)-N-[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-3-(methyl sulfonyl)-L-alanyl}amino)-4-phenylbutanoyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide | Organic compounds | Organic acids and derivatives | Peptidomimetics | Hybrid peptides |
| Explore | n/a | 076 | (S)-N-((1R,2S)-1-((2R,3R)-3-benzyloxiran-2-yl)-1-hydroxy-3-phenylpropan-2-yl)-3-methyl-2-(2-phenoxyacetamido)butanamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 077 | (3S)-5-biphenyl-4-yl-3-hydroxypentanoic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Biphenyls and derivatives |
| Explore | n/a | 079 | (S)-N-((2S,3S,4R,5R)-4-amino-3,5-dihydroxy-1,6-diphenylhexan-2-yl)-3-methyl-2-(2-phenoxyacetamido)butanamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 07B | dimethyl (1S,2S,4S,5S)-4,5-dihydroxycyclohexane-1,2-dicarboxylate | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Alcohols and polyols |
| Explore | n/a | 07C | 2-methylsulfanyl-10-nitro-pyrido[3,4-g]quinazoline | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 07D | Trans-Geranyl BACTERIOCHLOROPHYLL A | n/a | n/a | n/a | n/a |
| Explore | n/a | 07E | (3S)-3-hydroxybutyl beta-D-xylopyranoside | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbohydrates and carbohydrate conjugates |
| Explore | n/a | 07F | 5-benzyl-2-(3-fluoro-2-hydroxyphenyl)-6-methyl-3-(2-phenylethyl)pyrimidin-4(3H)-one | Organic compounds | Benzenoids | Phenols | Halophenols |
| Explore | n/a | 07G | 3-[(1S)-2-(tert-butylamino)-1-{N-[(3,4-difluorophenyl)methyl]formamido}-2-oxoethyl]-6-chloro-1H-indole-2-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Indoles and derivatives | Indolecarboxylic acids and derivatives |
| Explore | n/a | 07H | [4-(2H-chromen-3-ylmethyl)piperazin-1-yl]-[3-(1H-pyrazol-5-yl)phenyl]methanone | Organic compounds | Organoheterocyclic compounds | Azoles | Pyrazoles |
| Explore | n/a | 07I | Spliceostatin E (form I) | Organic compounds | Organoheterocyclic compounds | Pyrans | Pyranones and derivatives |
| Explore | DB11886 | 07J | 3-(2,6-dichloro-3,5-dimethoxyphenyl)-1-(6-{[4-(4-ethylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)-1-methylurea | Organic compounds | Organoheterocyclic compounds | Diazinanes | Piperazines |
| Explore | n/a | 07K | 8-methylquinolin-4-amine | Organic compounds | Organoheterocyclic compounds | Quinolines and derivatives | Hydroquinolines |
| Explore | n/a | 07L | 7-hydroxy-2H-chromen-2-one | Organic compounds | Phenylpropanoids and polyketides | Coumarins and derivatives | Hydroxycoumarins |
| Explore | n/a | 07M | 8-{[(2-cyanopyridin-3-yl)methyl]sulfanyl}-6-hydroxy-3,4-dihydro-1H-pyrano[3,4-c]pyridine-5-carbonitrile | Organic compounds | Organoheterocyclic compounds | Pyranopyridines | n/a |
| Explore | n/a | 07N | 2-[(3S,4R)-4-{[(3,4-dichloro-5-methyl-1H-pyrrol-2-yl)carbonyl]amino}-3-fluoropiperidin-1-yl]-1,3-thiazole-5-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Thiazoles |
| Explore | n/a | 07P | N-[(2S,3R)-10-[(1R,2R)-2-decylcyclopropyl]-1-(alpha-D-galactopyranosyloxy)-3-hydroxydecan-2-yl]hexacosanamide | Organic compounds | Lipids and lipid-like molecules | Sphingolipids | Glycosphingolipids |
| Explore | n/a | 07Q | 1-[(1R)-1-(3-methoxyphenyl)ethyl]-3-(4-pyridin-4-yl-1,3-thiazol-2-yl)urea | Organic compounds | Benzenoids | Phenol ethers | Anisoles |
| Explore | n/a | 07R | 1-[(3-hydroxyphenyl)methyl]-3-(4-pyridin-4-yl-1,3-thiazol-2-yl)urea | Organic compounds | Organoheterocyclic compounds | Azoles | Thiazoles |
| Explore | n/a | 07S | 1-(morpholin-4-yl)-2-[4-(2-{[5-(pyridin-3-yl)-1,3-thiazol-2-yl]amino}pyridin-4-yl)piperazin-1-yl]ethanone | Organic compounds | Organoheterocyclic compounds | Diazinanes | Piperazines |
| Explore | n/a | 07T | 6-(3-aminobenzyl)-4-methyl-2-methylsulfinyl-4,6-dihydro-5H-thieno[2',3':4,5]pyrrolo[2,3-d]pyridazin-5-one | Organic compounds | Organoheterocyclic compounds | Thienopyrroles | n/a |
| Explore | n/a | 07U | 2-methyl-N~1~-[3-(pyridin-4-yl)-2,6-naphthyridin-1-yl]propane-1,2-diamine | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Bipyridines and oligopyridines |
| Explore | n/a | 07V | (5R)-2-methyl-5-(prop-1-en-2-yl)cyclohex-2-en-1-one | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Monoterpenoids |