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5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine

A0A6D2WUT6 deleted

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ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand 2TM

UniProtDrugBankPDB LigandDomain LabelECOD IDX GroupH GroupT GroupF Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand 2TM

UniProtDrugBankPDB IDLigand Acc.ChainRes No.Exp. DomainX GroupH GroupT GroupF Group
A0A6D2WUT6n/a7mkn2TMT101e7mknD4second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
A0A6D2WUT6n/a7mkn2TMT101e7mknD6cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
A0A6D2WUT6n/a7mko2TMD2004e7mkoD2second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
A0A6D2WUT6n/a7mko2TMD2004e7mkoD3cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
A0A6D2WUT6n/a7mko2TMD2004e7mkoD4alpha/beta-Hammerhead/Barrel-sandwich hybridalpha/beta-Hammerhead/Barrel-sandwich hybridSingle hybrid motifn/a
A0A6D2WUT6n/a7mko2TMD2004e7mkoD6central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5